CN184883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_THEGJ (50S ribosomal protein L2P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.810e-55 Identity = 118/239 (49.37%), Postives = 151/239 (63.18%), Query Frame = 3 Query: 9 QRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 QR+G G+ F++ +H +G ++ L+ + L+GVV EI+HDPGR AP+ARV F K+L +A EG+ GQ +Y G +A + +GN LP+ IPEG V N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG IAARRTGR Sbjct: 8 QRRGKGTTTFRAPSHRYRGAVKYVPLNIVKEKT-LRGVVEEILHDPGRTAPVARVKFEDG-----TKKLILAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYNIEGVPGDGGKYVRAGGTYALVVSR--ERDKVIVQLPSGELKQFKPECRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHIAARRTGR 237
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_PYRKO (50S ribosomal protein L2P OS=Pyrococcus kodakaraensis GN=rpl2p PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.793e-55 Identity = 118/239 (49.37%), Postives = 151/239 (63.18%), Query Frame = 3 Query: 9 QRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 QR+G G+ F++ +H +G ++ L+ + L+GVV EI+HDPGR AP+ARV F K+L IA EG+ GQ +Y G +A + +GN LP+ IPEG V ++E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG IAARRTGR Sbjct: 8 QRRGKGTTTFRAPSHRYRGAVRYVPLNLVQERT-LRGVVEEILHDPGRTAPVARVKFEDG-----TKKLIIAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYDIEGVPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHIAARRTGR 237
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_PYRAB (50S ribosomal protein L2P OS=Pyrococcus abyssi GN=rpl2p PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 8.175e-55 Identity = 117/239 (48.95%), Postives = 151/239 (63.18%), Query Frame = 3 Query: 9 QRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 QR+G GS F+S +H +G ++ L++ + + L+GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + +GN LP+ IPEG V N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG IAARRTGR Sbjct: 8 QRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGR 237
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_PYRHO (50S ribosomal protein L2P OS=Pyrococcus horikoshii GN=rpl2p PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.379e-54 Identity = 115/239 (48.12%), Postives = 151/239 (63.18%), Query Frame = 3 Query: 9 QRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 QR+G GS F+S +H +G ++ L++ + + ++GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + +GN LP+ IPEG + N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG IAARRTGR Sbjct: 8 QRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTIRGVVEEIMHDPGRTAPVARVKFENGM-----EKLIIAPEGLLVGQEIYIGPDAPVEIGNTLPLAKIPEGTYIYNIEGVPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFDPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGR 237
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_HALSA (50S ribosomal protein L2P OS=Halobacterium salinarium GN=rpl2p PE=3 SV=3) HSP 1 Score: 212.231 bits (539), Expect = 2.379e-54 Identity = 115/241 (47.72%), Postives = 147/241 (61.00%), Query Frame = 3 Query: 3 RAQRKGAG-SVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 + QR+G G S F++ +H K + E L G V ++ HDP R AP+ARV F + L +A+EG+ G + G AT+ GN LP+ IPEG VCNVE H GD G ARA G A +++H + D T V+LPSG K + CRA IG VAGGGRTEKP +KAGN +HK + + WP+VRGVAMN V+HP GGG QH G +V RDA PG+KVG IA++RTGR Sbjct: 6 QGQRRGRGTSTFRAPSHRYKAELSHKRT---EDTDVLAGEVIDVEHDPARSAPVARVAFEDD-----DQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTH--ERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKHHKMKARGTKWPRVRGVAMNAVDHPFGGGGRQHPGRPKSVSRDAAPGRKVGDIASKRTGR 236
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_HALS3 (50S ribosomal protein L2P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.379e-54 Identity = 115/241 (47.72%), Postives = 147/241 (61.00%), Query Frame = 3 Query: 3 RAQRKGAG-SVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 + QR+G G S F++ +H K + E L G V ++ HDP R AP+ARV F + L +A+EG+ G + G AT+ GN LP+ IPEG VCNVE H GD G ARA G A +++H + D T V+LPSG K + CRA IG VAGGGRTEKP +KAGN +HK + + WP+VRGVAMN V+HP GGG QH G +V RDA PG+KVG IA++RTGR Sbjct: 6 QGQRRGRGTSTFRAPSHRYKAELSHKRT---EDTDVLAGEVIDVEHDPARSAPVARVAFEDD-----DQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTH--ERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKHHKMKARGTKWPRVRGVAMNAVDHPFGGGGRQHPGRPKSVSRDAAPGRKVGDIASKRTGR 236
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_IGNH4 (50S ribosomal protein L2P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl2p PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.106e-54 Identity = 119/248 (47.98%), Postives = 155/248 (62.50%), Query Frame = 3 Query: 3 RAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA 743 R QR G G+ +++ H R P ++ S + + + +G V E+ HDPGR PLA + + + AAEGMYTGQ V G A + GN+LP+ +IPEG + NVE GD G LAR+ G YA+++ + ++ ++LPSG K + + RA IG AG GR EKPLLKAGNAY+K++ K WP VRGVAMN V HPHGGGNHQ G+ +TV R+APPGQKVG IAAR TGR QA A Sbjct: 6 RVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLAHIVIPNVADFW-----IPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKS--GNSAIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPGQKVGHIAARCTGRGCKQAKA 246
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_METS3 (50S ribosomal protein L2P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl2p PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.057e-54 Identity = 113/241 (46.89%), Postives = 150/241 (62.24%), Query Frame = 3 Query: 9 QRKGAGSVFKSHTHHR-KGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLR 728 QR+G G+ HR K ++RS D E+ G +KG+V +I+HDP R AP+A V F + +K+ +A E + + CG A + GN LP+ IPEG + ++E+ GD G R+SG YA +I+H D + + V+LPSG K + CRA IG VAGGGR EKP LKAGN +H ++ K + VRGVAMN V+HPHGGGN QH G +TV R APPG+KVG IAA+RTG R Sbjct: 8 QRRGRGTPAHRVASHRFKDKIRYRSYDALEKEGSIKGIVTDIVHDPARTAPIAEVKFENG-----EKKFILAPESIQIDDEIECGISAPIKFGNTLPLAEIPEGTPIYDIENTPGDGGRFVRSSGTYASLITH--DANQSVVELPSGELKYLNPRCRASIGVVAGGGRKEKPFLKAGNRWHAYKAKGKKFMTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAAKRTGLKR 241
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_METKA (50S ribosomal protein L2P OS=Methanopyrus kandleri GN=rpl2p PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.299e-54 Identity = 112/241 (46.47%), Postives = 144/241 (59.75%), Query Frame = 3 Query: 3 RAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 R QR G G +++ +H +G + R D E+ G + G V E++HDP R AP+ARV F ++ L + EG G + CG A + GN LP+ IPEG + N+E GD G ARA G YA II+H D T V+LPSG + CRA IG ++GGG+ EKP +KAG Y+ R K WPKVRGVAMN V+HP GGGNHQ G +T+ R PPG+KVG IAAR+TGR Sbjct: 6 RPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVARVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHIAARKTGR 239
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_METTP (50S ribosomal protein L2P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl2p PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.180e-53 Identity = 111/240 (46.25%), Postives = 151/240 (62.92%), Query Frame = 3 Query: 6 AQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 722 +Q +G G+ +++ +H + A + + F ++G+V +I+HDP R AP+A V + +K+ +A EG Y GQ + CG A + GN LP+ SIPEG +CN+E G G ARASG Y ++++H D T V+LPSG K + C A IG VAGGGRTEKPL+KAG +++K+R K WP+VRGVAMN V+HP GGG QH G TV R PPG+KVG IAARRTG+ Sbjct: 7 SQNRGKGTPTYRAPSHRYR--ADIKHIKFS--GDLVRGIVEDIMHDPARTAPVALVRLENG-----EKQYVLATEGTYIGQEIACGPAAEIQPGNTLPLASIPEGMPICNIESKPGHGGQFARASGVYGILVAH--DVGATVVQLPSGEMKWLNPNCLATIGVVAGGGRTEKPLVKAGKSFYKYRSKAVKWPRVRGVAMNAVDHPFGGGGRQHPGRPKTVSRGTPPGRKVGSIAARRTGK 235 The following BLAST results are available for this feature:
BLAST of CN184883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184883 ID=CN184883; Name=CN184883; organism=Citrus sinensis; type=EST; length=750bpback to top |