CN184883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_NEIMF (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 9 QRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 629 + KG G H HH +R +DF + V I +DP R A +A + + ++ IA G+ G + G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 52 RHKGGG-----HKHH------YRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADG-----ERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_NEIMA (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup A GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 9 QRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 629 + KG G H HH +R +DF + V I +DP R A +A + + ++ IA G+ G + G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 52 RHKGGG-----HKHH------YRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADG-----ERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_MARMS (50S ribosomal protein L2 OS=Marinomonas sp. (strain MWYL1) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 3 Query: 72 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRL 725 +R +DF + VV + +DP R A +A + + ++ IA++GM G V+ G A + GN LP+++IP G+ V VE G +AR++G A +++ T R++ SG + + + CRA +G+V+ + + L KAG R P VRG AMNPV+HPHGGG + G V P + + +RT +L Sbjct: 62 YRMVDFRRNKDGISAVVERLEYDPNRSANIALIRYADG-----ERRYIIASKGMVAGNIVFSGADAPIKAGNTLPLQNIPVGSTVHCVELKPGKGAQVARSAGASAQLVAREGRYVTLRLR--SGEMRKVLTECRATLGEVSNSEHSLRVLGKAGATRW-----RGVRPTVRGAAMNPVDHPHGGGEGRSKGGRHPVTPWGVPTKGYKTRSNKRTDKL 267
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_GEOSW (50S ribosomal protein L2 OS=Geobacillus sp. (strain WCH70) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 72/213 (33.80%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 9 QRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 629 ++ G + K H+ G Q+R +DF + G VA I +DP R A +A + + +K IA + + G + G A + VGN LP+ +IP G V N+E G G L RA+G A ++ + V+L SG ++I CRA +G+V G + L+K G A R W P VRG MNPV+HPHGGG Sbjct: 39 KKAGRNNQGKITVRHQGGGHKRQYRIIDFKRDKDGIPGRVATIEYDPNRSANIALIHYADG-----EKRYIIAPKNLKVGMEIMSGPDADIKVGNALPLENIPVGTFVHNIELKPGRGGQLVRAAGTSAQVL--GKEGKYVIVRLASGEVRMILGACRATVGEV---GNEQHELVKIGKA------GRARWLGIRPTVRGSVMNPVDHPHGGG 235
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_EHRCR (50S ribosomal protein L2 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 71/201 (35.32%), Postives = 102/201 (50.75%), Query Frame = 3 Query: 72 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTV 662 +R +DF + V + +DP R A +A +++ +K IA G+ G V G A ++ GN L ++SIP G V NVE G+ GV+AR++G YA ++S D ++L SG + + S CRA IG V+ L KAG R+ W P VRGVAMNP++HPHGGG + G + V Sbjct: 62 YRVVDFKRNKVGVSATVERLEYDPNRTAFIALLSYDDG-----EKSYIIAPNGLKKGDVVISGDGADILPGNCLLLKSIPVGTFVHNVELRPGNGGVIARSAGTYAQLMS--KDGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKAG---------RSRWLGIRPTVRGVAMNPIDHPHGGGEGKTSGGRNPV 246
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_CHLAD (50S ribosomal protein L2 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 70/209 (33.49%), Postives = 106/209 (50.72%), Query Frame = 3 Query: 9 QRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 629 ++ G + + HR G + +R +DF + V I +DP R A +A + + +K IA G+ G V G A + VGN LP+ +IP G + N+E +G GVL RA+G A +++ + D +++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 39 KKAGRNNQGRITVRHRGGGHKRFYRIIDFKRDKFGIPAKVQAIEYDPNRSARIALLAYVDG-----EKRYIIAPLGLKVGDTVMSGPNAEIRVGNALPLGAIPLGTQIHNIELEIGRGGVLVRAAGTAAQLMA--KEGDYATIRMPSGEVRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_CELJU (50S ribosomal protein L2 OS=Cellvibrio japonicus (strain Ueda107) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 73/219 (33.33%), Postives = 108/219 (49.32%), Query Frame = 3 Query: 3 RAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGGNHQHIG 647 +++ G + + T H G +R +DF + V I +DP R A +A V + ++ IA +G+ G + G A + VGN LPVR+IP G+V+ VE G LAR++G A +++ D ++L SG + + S CRA +G+V+ + L KAG KR P VRGVAMNPV+HPHGGG + G Sbjct: 37 KSKSGGRNNTGRITTRHVGGGHKQHYRIVDFRRNKDGIPATVERIEYDPNRTAYIALVVYADG-----ERRYIIAPKGLSAGDKIESGNAAAIKVGNTLPVRNIPLGSVIHCVELKPGKGAQLARSAGASAQLVA--KDGAYVTLRLRSGEMRKVLSDCRATLGEVSNTEHNLRSLGKAG-------AKRWLGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_BREBN (50S ribosomal protein L2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 74/216 (34.26%), Postives = 101/216 (46.76%), Query Frame = 3 Query: 3 RAQRKGAGSVFKSHT---HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 629 +A R G + H H RK +R +DF + G VA I +DP R A +A + + +K IA + G + G A + +GN LP+ IP G + N+E G G L RA+G A ++ D + V+L SG + I + CRA IGQV G + LL G A R+ W P VRG MNP +HPHGGG Sbjct: 40 KAGRNNQGRITVRHQGGGHKRK----YRIIDFKRNKDGIIGRVATIEYDPNRSANIALINYADG-----EKRYIIAPHNLKVGDQIVSGADADIKIGNALPMEKIPVGTTIHNIELKPGKGGQLVRAAGTSAQLLGR--DGEFVIVRLSSGETRRIHNVCRATIGQV---GNLDHELLNIGKA------GRSRWLGIRPTVRGSVMNPNDHPHGGG 235
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_BACP2 (50S ribosomal protein L2 OS=Bacillus pumilus (strain SAFR-032) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 70/191 (36.65%), Postives = 97/191 (50.79%), Query Frame = 3 Query: 69 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 629 Q+R +DF + G VA I +DP R A +A V + +K +A +G+ G V G +A + GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGGG Sbjct: 61 QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALVNYADG-----EKRYILAPKGIQVGTEVTSGPEADIKPGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVL--GKEGKYVLVRLNSGEVRMILSACRATIGQV---GNEQHELINIGKA------GRSRWKGVRPTVRGSVMNPNDHPHGGG 235
BLAST of CN184883 vs. ExPASy Swiss-Prot
Match: RL2_ACIBY (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AYE) GN=rplB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21 Identity = 68/206 (33.01%), Postives = 106/206 (51.46%), Query Frame = 3 Query: 72 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 689 +R +DF + VV I +DP R A +A + + ++ IA +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 62 YRIVDFKRNKDGVPAVVERIEYDPNRTAHIALLKYADG-----ERRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251 The following BLAST results are available for this feature:
BLAST of CN184883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184883 ID=CN184883; Name=CN184883; organism=Citrus sinensis; type=EST; length=750bpback to top |