CN184875

Overview
NameCN184875
Unique NameCN184875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12
Identity = 49/125 (39.20%), Postives = 64/125 (51.20%), Query Frame = -1
Query:  364 GRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADE-NFKLKHTGPGVLSMANAGP-DTNGSQFFITTVITSWLDGRHVVFGKVL 732
            G I + L+GK  PK V NF AL              YY G  FHR++P F+IQ            ES +GE F DE + +LK    G+L MAN G  ++N SQFFIT      L  +H +FGK++
Sbjct:   22 GEIEVELWGKECPKAVRNFLALTMEG----------YYDGVIFHRVVPGFIIQSGDPTGTGMGG-ESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIV 135          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CWC27_RHIOR (Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae GN=cwc27 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12
Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = -1
Query:  307 GRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSG--MDVVRKIEAEGRQSGEP 732
            G I + L+GK  P+   NF  LC             YY  + FHRI+P F++Q            ES++ + F DE + +L+    G++ +AN G + NGSQFFIT      L  RH +FG+V      +V++  E E  ++  P
Sbjct:   22 GDIEIELWGKEAPRATRNFIQLCLEG----------YYDNTIFHRIVPGFLVQGGDPTGTGQGG-ESVYEDGFPDEFHSRLRFNRRGLVGVANTGQNDNGSQFFITLDRADELTKRHTLFGRVAGDTLFNVMKMTELEIDENERP 155          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11
Identity = 50/125 (40.00%), Postives = 63/125 (50.40%), Query Frame = -1
Query:  364 IGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL 735
            +G + + L  +  PK V NF  L   +KG        YYK  +FHR I  FMIQ            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  321 LGDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 434          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_BACSU (Peptidyl-prolyl cis-trans isomerase B OS=Bacillus subtilis GN=ppiB PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11
Identity = 56/157 (35.67%), Postives = 71/157 (45.22%), Query Frame = -1
Query:  325 YFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGP-GVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGM---------DVVRKIEAEG 765
            YF +E G K    I   L+ +A P TV NF  L              +Y G +FHR+IP F+ Q                G +   E     HT   G LSMA+AG DT GSQFFI       L+G H VFGKV SG+         DV++++  EG
Sbjct:    5 YFLLEDGNK----IEFELYPEAAPGTVANFEKLANEG----------FYDGLTFHRVIPGFVSQGGCPHGTGTGGP----GYTIKCETEGNPHTHEAGALSMAHAGKDTGGSQFFIVHEPQPHLNGVHTVFGKVTSGLEFAKNMSNGDVMKEVRVEG 143          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11
Identity = 51/124 (41.13%), Postives = 62/124 (50.00%), Query Frame = -1
Query:  364 GRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL 732
            G I + L  +  PK V NF  L   +KG        YYK  +FHR I  FMIQ            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  309 GDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 421          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11
Identity = 51/124 (41.13%), Postives = 62/124 (50.00%), Query Frame = -1
Query:  364 GRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL 732
            G I + L  +  PK V NF  L   +KG        YYK  +FHR I  FMIQ            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  320 GDINLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVI 432          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_HELPY (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori GN=ppiA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11
Identity = 54/153 (35.29%), Postives = 69/153 (45.10%), Query Frame = -1
Query:  280 GRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLS--GMDVVRKIEAEGRQSGEPKSKVVISNS 732
            G I + LF K  P+ V NF  L           K  +Y G +FHR+I  F+ Q                    A    K K    G +SMA+AG DT GSQFF+  V    LDG H VFGK+ S  G+ V+ KI     + G+    VV S+S
Sbjct:   28 GNIALELFYKDAPQAVSNFVTLA----------KEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGPGHRIKCEVAHNPNKHKR---GSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAEGLSVLDKI-----KQGDIIESVVFSSS 162          
The following BLAST results are available for this feature:
BLAST of CN184875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
CWC27_CRYNE2.641e-1239.20Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]
CWC27_RHIOR5.885e-1232.41Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae... [more]
PPIL2_ASPFU1.311e-1140.00Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIB_BACSU1.311e-1135.67Peptidyl-prolyl cis-trans isomerase B OS=Bacillus ... [more]
PPIL2_ASPOR2.920e-1141.13Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_EMENI4.982e-1141.13Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]
PPIA_HELPY6.506e-1135.29Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184875 ID=CN184875; Name=CN184875; organism=Citrus sinensis; type=EST; length=822bp
GAGGAGTAACTGTGTTCTTACAAGCAAATGCAAGCAATTCCACTATAAAC
AATGAAAAATAATGAAACACAAACTATTCTAGGAATAACAGAGCTATTAC
CAAGCTCGAATCTGTTAAAGACCATTGCAAATTGCAATAAGGAATTAGAG
TTGTTTTTCTACAGACCATATACCAACCCGAATGGATGTGGAACAAAACA
GATAGCACAAATATAGGACAAGTTATCAATTTCCATATAAAAATTTAATA
AGGATGGTCTGTCACAAAGCCATTTCACCACTGTTAGATATAACAACTTT
ACTTTTGGGCTCCCCACTCTGCCTTCCTTCCGCTTCAATTTTGCGGACAA
CGTCCATCCCAGAGAGCACTTTGCCAAACACAACATGGCGGCCATCCAAC
CAGCTAGTTATGACAGTCGTAATGAAGAACTGTGACCCATTGGTGTCTGG
CCCAGCATTTGCCATCGACAGAACTCCTGGTCCAGTGTGCTTCAGTTTAA
AGTTCTCATCAGCAAAACTTTCCCCAAATATTGACTCTCCACCACGCCCA
TCACCAAGAGTAAAATCACCGCCCTGGATCATAAAGCTTGGAATAATCCT
GTGAAATGAGCTCCCTTTATAATAAAGTGTTTTCCCACTCTTCCCAATTC
CTTTCTCCCCTGTGCAGAGTGCTCGGAAGTTTTCTACAGTTTTAGGGACA
GCCTTCCCAAATAGGCCCATAACTATGCGACCAATGGGTTTCCCACCAAC
CTCGATATCAAAGTAAACTTTGTGGGTCACTTTTTCCAATTCCTCTCTTG
AGTTGCCTTCCTGAATGAAAGC
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