CN184875

Overview
NameCN184875
Unique NameCN184875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.887e-51
Identity = 105/166 (63.25%), Postives = 123/166 (74.10%), Query Frame = -1
Query:  271 YFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 765
            +FD+ +GG+P GRI+M LF   VPKT ENFRALCTGEKGIG SGK + Y+GS FHR+IP FM+Q           GESI+G  FADENF  KHT PG+LSMANAGP TNGSQFFITTV T  LDG+HVVFGKV+ GMDVVRKIEA     G+ P S+V I+  G++
Sbjct:    5 FFDMTIGGQPAGRIIMELFPD-VPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKIAKCGQL 169          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.770e-51
Identity = 107/173 (61.85%), Postives = 124/173 (71.68%), Query Frame = -1
Query:  265 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEMAL 780
            +T+KVYFDIE GGKP+GRIVMGL+GK VPKT ENFRAL TG+   G+      Y+GSSFHRII +FMIQ           G+SI+G  F DENFKLKHTGPGVLSMANAG DTNGSQFFI TV T+WLD RHVVFG VL GMDVV  +E      G+ P   + I+ SGE+ +
Sbjct:   43 ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGELPI 214          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.770e-51
Identity = 106/172 (61.63%), Postives = 125/172 (72.67%), Query Frame = -1
Query:  271 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 783
            K+T KV+FDIE G KP+GRIV+GL+GK VPKT ENFRAL TGEKG G       Y+GS+FHR+I SFMIQ           G+SI+GE FADENFKL+HT  G+LSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV +IE   +  G+ P   V I  SG++
Sbjct:   33 KITSKVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.431e-51
Identity = 106/184 (57.61%), Postives = 128/184 (69.57%), Query Frame = -1
Query:  271 FIQEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE-AEGRQSGEPKSKVVISNSGEM 819
            F+Q   +  + E +THKVYFDI+ G + +G+IVMGL+G  VPKTVENFRALCTGE G G       YKGS FHR+I +FMIQ           GESI+G  F DENF+LKHT P  LSMANAG DTNGSQFFITTV+TSWLDG+HVVFG+VL G D+V  IE A       PK  + I+++GE+
Sbjct:   18 FVQPAQAEPDAE-ITHKVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEI 193          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.431e-51
Identity = 104/172 (60.47%), Postives = 127/172 (73.84%), Query Frame = -1
Query:  271 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 783
            KVT KV+FDIEV GKP+ RI++GLFGK VPKTVENF+ L  G +   K G+T  YKGS+FHR+I SFMIQ           G SI+G+ F DENFKL+H G G LSMANAGPDTNGSQFFITTV TSWLDG+HVVFGKV+ GM++VR+IE+E   S + P   + I++ G +
Sbjct:   29 KVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCGHI 198          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.399e-51
Identity = 107/186 (57.53%), Postives = 130/186 (69.89%), Query Frame = -1
Query:  271 AFIQEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE--AEGRQSGEPKSKVVISNSGEM 822
            A +   +++    K+T KV+FDIE G KP+GR+V+GL+GK VPKT ENFRAL TGEKG G       Y+GS+FHR+I  FMIQ           G+SI+GE FADENFKL+HT  G+LSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G ++V +IE   +GR S  P   V I  SGE+
Sbjct:   19 ALVHAEDAQPRGPKITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGR-SDRPVETVKIVKSGEL 196          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.399e-51
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +V+FD+   G+P+GRIVM L    VPKT ENFRALCTGEKG G       YKGS FHR+IP+FM Q           G+SI+G  F DENF+LKHTGPG+L MANAGP+TNGSQFFITT  TSWLD RHVVFG V+ GMDVV+K+E+ G QSG+   K+ + + G++
Sbjct:    5 RVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQI 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 200.29 bits (508), Expect = 1.097e-50
Identity = 106/174 (60.92%), Postives = 126/174 (72.41%), Query Frame = -1
Query:  271 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEA---EGRQSGEPKSKVVISNSGEM 783
            KVT KVYFD+ +G + IGR+V+GLFGK VPKTV+NF AL TGEKG G       YK S FHR+I  FMIQ           G+SI+GE F DENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVVRK+E+   +GR   +P   V I++ G++
Sbjct:   41 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRD--KPLKDVTIADCGKI 205          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.097e-50
Identity = 97/168 (57.74%), Postives = 120/168 (71.43%), Query Frame = -1
Query:  268 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEMA 771
            +V+FD+ + G PIGRI M LF    P T ENFRALCTGEKG+GK GK L++KGS FHR+IP FM Q           GESI+G  F DENF  KHTG G+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFG+V+ G+DVV+ IE  G  SG+    V I++ G+++
Sbjct:    5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.871e-50
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = -1
Query:  271 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-GEPKSKVVISNSGEM 783
            KVT KVYFD+ +G + +GR++ GLFGK VPKTV+NF AL TGEKG G       YK S FHR+I  FMIQ           G+SI+GE F DENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GM+VVRK+E+    S  +P   V+I++ G++
Sbjct:   41 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKI 205          
The following BLAST results are available for this feature:
BLAST of CN184875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
CYPX_USEUD2.887e-5163.25Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPIB_CRYNE3.770e-5161.85Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ASPFU3.770e-5161.63Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_YARLI6.431e-5157.61Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_SCHMA6.431e-5160.47Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_ASPNG8.399e-5157.53Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIA_BLAGE8.399e-5158.68Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIB_BOVIN1.097e-5060.92Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
CP18D_ARATH1.097e-5057.74Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIB_HUMAN1.871e-5059.30Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184875 ID=CN184875; Name=CN184875; organism=Citrus sinensis; type=EST; length=822bp
GAGGAGTAACTGTGTTCTTACAAGCAAATGCAAGCAATTCCACTATAAAC
AATGAAAAATAATGAAACACAAACTATTCTAGGAATAACAGAGCTATTAC
CAAGCTCGAATCTGTTAAAGACCATTGCAAATTGCAATAAGGAATTAGAG
TTGTTTTTCTACAGACCATATACCAACCCGAATGGATGTGGAACAAAACA
GATAGCACAAATATAGGACAAGTTATCAATTTCCATATAAAAATTTAATA
AGGATGGTCTGTCACAAAGCCATTTCACCACTGTTAGATATAACAACTTT
ACTTTTGGGCTCCCCACTCTGCCTTCCTTCCGCTTCAATTTTGCGGACAA
CGTCCATCCCAGAGAGCACTTTGCCAAACACAACATGGCGGCCATCCAAC
CAGCTAGTTATGACAGTCGTAATGAAGAACTGTGACCCATTGGTGTCTGG
CCCAGCATTTGCCATCGACAGAACTCCTGGTCCAGTGTGCTTCAGTTTAA
AGTTCTCATCAGCAAAACTTTCCCCAAATATTGACTCTCCACCACGCCCA
TCACCAAGAGTAAAATCACCGCCCTGGATCATAAAGCTTGGAATAATCCT
GTGAAATGAGCTCCCTTTATAATAAAGTGTTTTCCCACTCTTCCCAATTC
CTTTCTCCCCTGTGCAGAGTGCTCGGAAGTTTTCTACAGTTTTAGGGACA
GCCTTCCCAAATAGGCCCATAACTATGCGACCAATGGGTTTCCCACCAAC
CTCGATATCAAAGTAAACTTTGTGGGTCACTTTTTCCAATTCCTCTCTTG
AGTTGCCTTCCTGAATGAAAGC
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