CN184875

Overview
NameCN184875
Unique NameCN184875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.444e-50
Identity = 102/164 (62.20%), Postives = 117/164 (71.34%), Query Frame = -1
Query:  277 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSG 768
            VYFDI + GKP GRI   LF   VPKT +NFRALCTGE+G G       YKGS FHR+IP FM+Q           G+SI+GE FADENFKLKH+ PG+LSMANAGP+TNGSQFFITTV  SWLDG HVVFGKV   M++V KIE+ G  SG  K+KVVI + G
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCG 159          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.444e-50
Identity = 104/184 (56.52%), Postives = 126/184 (68.48%), Query Frame = -1
Query:  265 EGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAE--GRQSGEPKSKVVISNSGEMAL 810
            +G   E   KVT K++FDIE+GG+  GRIV+GLFG AVPKTVENF+ L TG KG G       Y+GS FHRIIP+FMIQ           G SI+G  F DE+F LKH GPGVLSMANAGP+TNGSQFFI TV T WLD RHVVFG V+ G+DVV+++E++   +    PK    I+ SGE+ L
Sbjct:   70 QGEVAELQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPKKPCKIAKSGELPL 246          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.169e-50
Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  268 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEMA 768
            VY D+   G+P+GR+V+ L    VPKT ENFRALCTGEKG G       YKGS+FHR+IP+FM Q           G+SI+G  F DENF LKH GPGVLSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV+KIE+ G +SG+   K+VI++ G+++
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQLS 206          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.169e-50
Identity = 100/180 (55.56%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  274 QEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGE 813
            QEG    +  +   +VY DI++G KP GRI M L    VP T ENFR LCT EKG G       +KGSSFHRIIP FM Q           G+SI+G+ F DENF LKHTGPG+LSMAN+GP+TNGSQFF+T   T WLDG+HVVFG++  G+DV+R+IEA+G + G+PK KV+IS+ GE
Sbjct:  127 QEGEPAVKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQKVIISDCGE 299          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.444e-50
Identity = 97/167 (58.08%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  268 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEMA 768
            VY D+   G+P+GR+V+ L    VPKT ENFRALCTGEKG G       YKGS+FHR+IP+FM Q           G SI+G  F DENF LKH GPGVLSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV+KIE+ G +SG+   K+VI++ G+++
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQLS 206          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.444e-50
Identity = 105/177 (59.32%), Postives = 125/177 (70.62%), Query Frame = -1
Query:  277 NSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-GEPKSKVVISNSG 804
            + R++  KVT KV+FD+ VG +  GR+V+GLFGK VPKTVENF AL TGEKG G       +KGS FHR+I  FMIQ           G+SI+G+ F DENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVVRK+E     S  +P   V I++ G
Sbjct:   25 DERKKGPKVTAKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCG 194          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.444e-50
Identity = 105/173 (60.69%), Postives = 122/173 (70.52%), Query Frame = -1
Query:  271 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEA--EGRQSGEPKSKVVISNSGEM 783
            K+T KVYFDIE  G+P+GRIVMGL+GK VPKT ENFRAL TGEKG G       Y+GS+FHR+I  FMIQ           G+SI+G  F DENFKL+HT  GVLSMANAG DTNGSQFFITT IT+WLDG+HVVFG+VL G D+V KI+   +G Q   P   V I   GE+
Sbjct:   32 KITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQD-RPTKDVKIVKCGEL 196          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 100/180 (55.56%), Postives = 123/180 (68.33%), Query Frame = -1
Query:  274 QEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGE 813
            QEG    +  +   +VY DI++G KP GRI M L    VP T ENFR LCT EKG G       +KGSSFHRIIP FM Q           G+SI+G+ F DENF LKHTGPG+LSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+R+IEA G + G+PK KV+I++ GE
Sbjct:  127 QEGEPAAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARGSKDGKPKQKVIIADCGE 299          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 100/180 (55.56%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  274 QEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGE 813
            QEG    +  +   +VY DI++G KP GRI M L    VP T ENFR LCT EKG G       +KGSSFHRIIP FM Q           G+SI+G+ F DENF LKHTGPG+LSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+R+IEA+G + G+PK KV+I++ GE
Sbjct:  127 QEGEPTAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVMIADCGE 299          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 100/180 (55.56%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  274 QEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGE 813
            QEG    +  +   +VY DI++G KP GRI M L    VP T ENFR LCT EKG G       +KGSSFHRIIP FM Q           G+SI+G+ F DENF LKHTGPG+LSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+R+IEA+G + G+PK KV+I++ GE
Sbjct:  127 QEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGE 299          
The following BLAST results are available for this feature:
BLAST of CN184875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
PPIA2_RHIOR2.444e-5062.20Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
CYPB_VICFA2.444e-5056.52Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIF_RAT4.169e-5058.08Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIE_BOVIN4.169e-5055.56Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIF_MOUSE5.444e-5058.08Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_CHICK5.444e-5059.32Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIB_ARTBE5.444e-5060.69Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIE_PONAB9.287e-5055.56Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIE_MOUSE9.287e-5055.56Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_HUMAN9.287e-5055.56Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184875 ID=CN184875; Name=CN184875; organism=Citrus sinensis; type=EST; length=822bp
GAGGAGTAACTGTGTTCTTACAAGCAAATGCAAGCAATTCCACTATAAAC
AATGAAAAATAATGAAACACAAACTATTCTAGGAATAACAGAGCTATTAC
CAAGCTCGAATCTGTTAAAGACCATTGCAAATTGCAATAAGGAATTAGAG
TTGTTTTTCTACAGACCATATACCAACCCGAATGGATGTGGAACAAAACA
GATAGCACAAATATAGGACAAGTTATCAATTTCCATATAAAAATTTAATA
AGGATGGTCTGTCACAAAGCCATTTCACCACTGTTAGATATAACAACTTT
ACTTTTGGGCTCCCCACTCTGCCTTCCTTCCGCTTCAATTTTGCGGACAA
CGTCCATCCCAGAGAGCACTTTGCCAAACACAACATGGCGGCCATCCAAC
CAGCTAGTTATGACAGTCGTAATGAAGAACTGTGACCCATTGGTGTCTGG
CCCAGCATTTGCCATCGACAGAACTCCTGGTCCAGTGTGCTTCAGTTTAA
AGTTCTCATCAGCAAAACTTTCCCCAAATATTGACTCTCCACCACGCCCA
TCACCAAGAGTAAAATCACCGCCCTGGATCATAAAGCTTGGAATAATCCT
GTGAAATGAGCTCCCTTTATAATAAAGTGTTTTCCCACTCTTCCCAATTC
CTTTCTCCCCTGTGCAGAGTGCTCGGAAGTTTTCTACAGTTTTAGGGACA
GCCTTCCCAAATAGGCCCATAACTATGCGACCAATGGGTTTCCCACCAAC
CTCGATATCAAAGTAAACTTTGTGGGTCACTTTTTCCAATTCCTCTCTTG
AGTTGCCTTCCTGAATGAAAGC
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