CN184875

Overview
NameCN184875
Unique NameCN184875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 106/168 (63.10%), Postives = 116/168 (69.05%), Query Frame = -1
Query:  268 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEMA 771
            +VYFDI +G KP GRIV  LF   VPKT ENFRALCTGEKG GKSGK L Y+GS FHRII +FMIQ           GESI+GE F DENF LKH  P +LSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VVR +E     S  P    VI+  GE+A
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGELA 172          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 101/168 (60.12%), Postives = 122/168 (72.62%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 771
            +VYFDI +GGK +GRI M L+   VPKT +NFR+LCTGEKGIGKSGK L+YKGS FHR+I  FMIQ           GESI+G  F DE F +KH  P +LSMANAGP+TNGSQFFITTV T  LDG+HVVFG+VL+G  VVR+IE    QSG+ P  + +I + GE+
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGEL 179          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 96/167 (57.49%), Postives = 121/167 (72.46%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +V+FD+    +P+GRIVM L    VPKT ENFRALCTGEKG G       YKGS FHR+IP+FM Q           G+SI+G  F DENF+LKHTG G+LSMANAG +TNGSQFFI TV T+WLD +HVVFG+V+ G+DVV+KIE+ G QSG+   K++++NSG +
Sbjct:   68 RVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.213e-49
Identity = 94/167 (56.29%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +V+FD++  G+ +GRIVM L    VPKT ENFRALCTGEKG G       YKGS+FHR+IP FM Q           G+SI+GE FADENF LKHT PG+LSMANAG +TNGSQFFI T +TSWLDG+HVVFG V  G+D+++K+E+ G  SG+   K+ I++ G++
Sbjct:    5 QVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSGKTSKKITIADCGQL 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 1.584e-49
Identity = 95/167 (56.89%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +VYFD+E  G+PIGR+V  L+   VPKT ENFRALCTGEKG G       Y GS FHR+IP FM+Q           G+SI+G  F DENFK  H  PG+LSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V+ G D+V+K+E+ G  SG  K+++V++ SGE+
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGEL 162          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +V+FDI++G +  GRI   LF   VPKT ENFRALCTGEKG+GK GK L++KGS FHR+I  FMIQ           GESI+GE F DENF+LKH  P +LSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  VVRKIE    Q+ +P + V I+  GE+
Sbjct:    8 RVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGEL 174          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.702e-49
Identity = 100/169 (59.17%), Postives = 120/169 (71.01%), Query Frame = -1
Query:  277 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE-AEGRQSGEPKSKVVISNSG 780
            +T K+YFDI+ G + +GRIV GL+GK VPKT ENF+ L TG+ G G       YKGS+FHR+I  FMIQ           G+SI+G  F DENFKL+HT PG+LSMANAGPD+NGSQFFITTV+TSWLDG+HVVFGKVL GMDVV KIE        +P   VVI++ G
Sbjct:   32 ITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCG 193          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.702e-49
Identity = 95/163 (58.28%), Postives = 116/163 (71.17%), Query Frame = -1
Query:  277 YFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSG 765
            +FD+   G+P+GRIV  LF   VPKT  NFRALCTGEKG G       Y GS+FHR+IP FM+Q           G+SI+GE F DENF LKH  PG+LSMANAGP+TNGSQFFITTV+T WLDG+HVVFG+V  GMDVV+K+E+ G  SG  ++++VI   G
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.702e-49
Identity = 101/172 (58.72%), Postives = 125/172 (72.67%), Query Frame = -1
Query:  271 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 783
            +VT KV+FD+E+GG+P+G+IV+GLFG+ VPKTV+NF  L    +G G       Y GS FHR+I +FMIQ           G SI+GE F DENFKL+H GPG LSMANAG DTNGSQFFITT  TSWLDG+HVVFGK+L GMDVVR+IEA  + +G+ P   VVI+N+G +
Sbjct:   23 RVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAGHI 187          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.019e-49
Identity = 101/167 (60.48%), Postives = 119/167 (71.26%), Query Frame = -1
Query:  271 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 768
            VYFDIE G KP+GR+V+GL+GK VPKT ENFRAL TGEKG G       Y+GS+FHR+I  FMIQ           G+SI+GE F DENFK++HT  G+LSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV  IE   +  G+ P+  V I  SGE+
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
The following BLAST results are available for this feature:
BLAST of CN184875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
PPID_RHIOR9.287e-5063.10Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_GIBZE9.287e-5060.12Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIA_DROME9.287e-5057.49Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
PPIA_HEMPU1.213e-4956.29Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
CYPH_YEAST1.584e-4956.89Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPID_EMENI2.069e-4958.68Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIB2_RHIOR2.702e-4959.17Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPH_SCHPO2.702e-4958.28Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
CYP6_CAEEL2.702e-4958.72Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIB_ASPOR6.019e-4960.48Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184875 ID=CN184875; Name=CN184875; organism=Citrus sinensis; type=EST; length=822bp
GAGGAGTAACTGTGTTCTTACAAGCAAATGCAAGCAATTCCACTATAAAC
AATGAAAAATAATGAAACACAAACTATTCTAGGAATAACAGAGCTATTAC
CAAGCTCGAATCTGTTAAAGACCATTGCAAATTGCAATAAGGAATTAGAG
TTGTTTTTCTACAGACCATATACCAACCCGAATGGATGTGGAACAAAACA
GATAGCACAAATATAGGACAAGTTATCAATTTCCATATAAAAATTTAATA
AGGATGGTCTGTCACAAAGCCATTTCACCACTGTTAGATATAACAACTTT
ACTTTTGGGCTCCCCACTCTGCCTTCCTTCCGCTTCAATTTTGCGGACAA
CGTCCATCCCAGAGAGCACTTTGCCAAACACAACATGGCGGCCATCCAAC
CAGCTAGTTATGACAGTCGTAATGAAGAACTGTGACCCATTGGTGTCTGG
CCCAGCATTTGCCATCGACAGAACTCCTGGTCCAGTGTGCTTCAGTTTAA
AGTTCTCATCAGCAAAACTTTCCCCAAATATTGACTCTCCACCACGCCCA
TCACCAAGAGTAAAATCACCGCCCTGGATCATAAAGCTTGGAATAATCCT
GTGAAATGAGCTCCCTTTATAATAAAGTGTTTTCCCACTCTTCCCAATTC
CTTTCTCCCCTGTGCAGAGTGCTCGGAAGTTTTCTACAGTTTTAGGGACA
GCCTTCCCAAATAGGCCCATAACTATGCGACCAATGGGTTTCCCACCAAC
CTCGATATCAAAGTAAACTTTGTGGGTCACTTTTTCCAATTCCTCTCTTG
AGTTGCCTTCCTGAATGAAAGC
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