CN184875

Overview
NameCN184875
Unique NameCN184875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.019e-49
Identity = 97/167 (58.08%), Postives = 116/167 (69.46%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            KV+FDI V G+  GR+   LF   VPKT ENFRALCTGEKG G SGK L+YK S FHRIIP FM Q           GESI+G +F DENF LKH G G+LSMANAGP+TNGSQFFIT V T WLDG H VFG+++ G  V+  +E  G +SG P +K+ I++ GE+
Sbjct:    8 KVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGSRSGMPSAKIEITDCGEL 174          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.862e-49
Identity = 101/173 (58.38%), Postives = 122/173 (70.52%), Query Frame = -1
Query:  268 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKI-EAEGRQSGEPKSKVVISNSGEMA 783
            KVT  VYFD++ G + +GR+ +GLFGK VPKT ENFRAL TGEKG G       Y+GS FHR+IP+FMIQ           G+SI+G  F DENFKL H  PG+LSMANAGPD+NGSQFFITTV T WLDG HVVFG+VLSG D+V+KI +AE     +P   V I  SG+++
Sbjct:   24 KVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQLS 189          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.862e-49
Identity = 100/169 (59.17%), Postives = 121/169 (71.60%), Query Frame = -1
Query:  277 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-GEPKSKVVISNSG 780
            +T K+YFDI+ G + +GRIV+GL+GK VPKT ENF+ L TGE G G       YKGS+FHR+I  FMIQ           G+SI+G  FADENFKL+H+ PG+LSMANAG DTNGSQFFITTV+T WLDG+HVVFG+VL GMDVV KIE     S  +P   VVI++ G
Sbjct:   32 ITDKIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIENTPTGSRSKPSVDVVIADCG 193          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.287e-48
Identity = 96/157 (61.15%), Postives = 112/157 (71.34%), Query Frame = -1
Query:  298 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSK 768
            VY D+   G+P+GR+V+ L    VPKT ENFRALCTGEKG G       YKGS+FHR+IPSFM Q           G+SI+G  F DENFKLKH GPGVLSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV+KIE+ G +SG+   K
Sbjct:   49 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKK 198          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.287e-48
Identity = 97/170 (57.06%), Postives = 115/170 (67.65%), Query Frame = -1
Query:  271 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 780
            V   V+FDI   G+P+GR+   LF   VPKT ENFRAL TGEKG G       YKGSSFHRIIP FM Q           G+SI+GE F DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM +V  +E  G ++G+   K+ IS+ G++
Sbjct:    2 VNPTVFFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGKTSKKITISDCGQL 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.287e-48
Identity = 97/170 (57.06%), Postives = 115/170 (67.65%), Query Frame = -1
Query:  271 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 780
            V   V+FDI   G+P+GR+   LF   VPKT ENFRAL TGEKG G       YKGSSFHRIIP FM Q           G SI+GE F DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G ++G+   K+ IS+ G++
Sbjct:    2 VNPTVFFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 2.987e-48
Identity = 97/170 (57.06%), Postives = 117/170 (68.82%), Query Frame = -1
Query:  271 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 780
            V   V+FDI V G+P+GR+   LF   VPKT ENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SI+GE F DENF LKHTGPG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFGKV  GM++V  +E  G ++G+   K+ I++ G++
Sbjct:    2 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 2.987e-48
Identity = 97/170 (57.06%), Postives = 117/170 (68.82%), Query Frame = -1
Query:  271 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 780
            V   V+FDI V G+P+GR+   LF   VPKT ENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SI+GE F DENF LKHTGPG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFGKV  GM++V  +E  G ++G+   K+ I++ G++
Sbjct:    2 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.902e-48
Identity = 105/183 (57.38%), Postives = 124/183 (67.76%), Query Frame = -1
Query:  271 IQEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 816
            + EGN      KVT KV+FDIEV  +P+GRI++GLFGK VPKTVENF+ L  G     K G+T  YKGS+FHR+I SFMIQ           G SI+GE F DENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VVR+IE     S + P   V I+N G +
Sbjct:   22 LSEGNG----PKVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCGHI 198          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.902e-48
Identity = 100/175 (57.14%), Postives = 124/175 (70.86%), Query Frame = -1
Query:  265 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE--AEGRQSGEPKSKVVISNSGEMAL 783
            K+T+KVYFDI+ G + +GRIV+GL+GK VP+T ENFRAL TGEKG G       Y+GS+FHR+I  FMIQ           G+SI+G  F DENFKL+HT  G+LSMANAG DTNGSQFFITT +T WLDG+HVVFG+VL G D+V KI+   +GR +  P   V I  SGE+ +
Sbjct:   31 KITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNVPKGR-NDRPLKDVKIVKSGELEM 197          
The following BLAST results are available for this feature:
BLAST of CN184875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
CYP6_RHIOR6.019e-4958.08Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIB_SCHPO7.862e-4958.38Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB1_RHIOR7.862e-4959.17Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIF_BOVIN2.287e-4861.15Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_RAT2.287e-4857.06Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_CRIGR2.287e-4857.06Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
PPIA_SAGOE2.987e-4857.06Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_AOTTR2.987e-4857.06Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
PPIB_SCHJA3.902e-4857.38Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_EMENI3.902e-4857.14Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184875 ID=CN184875; Name=CN184875; organism=Citrus sinensis; type=EST; length=822bp
GAGGAGTAACTGTGTTCTTACAAGCAAATGCAAGCAATTCCACTATAAAC
AATGAAAAATAATGAAACACAAACTATTCTAGGAATAACAGAGCTATTAC
CAAGCTCGAATCTGTTAAAGACCATTGCAAATTGCAATAAGGAATTAGAG
TTGTTTTTCTACAGACCATATACCAACCCGAATGGATGTGGAACAAAACA
GATAGCACAAATATAGGACAAGTTATCAATTTCCATATAAAAATTTAATA
AGGATGGTCTGTCACAAAGCCATTTCACCACTGTTAGATATAACAACTTT
ACTTTTGGGCTCCCCACTCTGCCTTCCTTCCGCTTCAATTTTGCGGACAA
CGTCCATCCCAGAGAGCACTTTGCCAAACACAACATGGCGGCCATCCAAC
CAGCTAGTTATGACAGTCGTAATGAAGAACTGTGACCCATTGGTGTCTGG
CCCAGCATTTGCCATCGACAGAACTCCTGGTCCAGTGTGCTTCAGTTTAA
AGTTCTCATCAGCAAAACTTTCCCCAAATATTGACTCTCCACCACGCCCA
TCACCAAGAGTAAAATCACCGCCCTGGATCATAAAGCTTGGAATAATCCT
GTGAAATGAGCTCCCTTTATAATAAAGTGTTTTCCCACTCTTCCCAATTC
CTTTCTCCCCTGTGCAGAGTGCTCGGAAGTTTTCTACAGTTTTAGGGACA
GCCTTCCCAAATAGGCCCATAACTATGCGACCAATGGGTTTCCCACCAAC
CTCGATATCAAAGTAAACTTTGTGGGTCACTTTTTCCAATTCCTCTCTTG
AGTTGCCTTCCTGAATGAAAGC
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