CN184875

Overview
NameCN184875
Unique NameCN184875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.303e-47
Identity = 93/166 (56.02%), Postives = 114/166 (68.67%), Query Frame = -1
Query:  271 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 768
            VYFD+   G+ +G+I   L+   VPKT ENFRALCTGEKG G       YKGS FHR+IP FM+Q           G+SI+G  FADENF  +H  PG+LSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V  G+D+V+KIE+ G  SG    K+VI  SG++
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.314e-47
Identity = 96/167 (57.49%), Postives = 118/167 (70.66%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +V+FDI++G +  GRI + L    VPKT ENFRALCTGEKG+GK GK L++KGS FHR+I  FMIQ           GESI+GE F DENF+LKH  P +LSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  VVRK+E    Q+ +P   V I   GE+
Sbjct:    9 RVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGEL 173          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.314e-47
Identity = 101/177 (57.06%), Postives = 118/177 (66.67%), Query Frame = -1
Query:  271 REELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEM 798
            R+    VT KV+FD+ +G K +GRIV+GLFG  VPKTVENF AL TGEKG G       YKGS FHR+I  FMIQ           G SI+GE+F DENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV  IE +     + P +   I NSG++
Sbjct:   30 RKRGPSVTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPLTDCTIVNSGKI 199          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 5.634e-47
Identity = 94/166 (56.63%), Postives = 114/166 (68.67%), Query Frame = -1
Query:  271 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 768
            V+FDI V G+P+GR+   LF   VPKT ENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SI+GE F DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG V  GM++V  +E  G ++G+   K+ I++ G++
Sbjct:    6 VFFDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.358e-47
Identity = 98/167 (58.68%), Postives = 116/167 (69.46%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +VY DI++G    GRI + L G  VPKT ENFRALCTGE G G       YK SSFHRIIP FM Q           G+SI+G  F DENF LKHTGPG LSMANAG +TNGSQFFI T  T+WLDG+HVVFG+V+SGM+VVR++E  G  SG+P  +VVI + GE+
Sbjct:  156 RVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGEL 315          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.610e-47
Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = -1
Query:  271 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE-AEGRQSGEPKSKVVISNSGEM 780
            + +KV+F I+ G  P+GR+V  L+   VPKT ENFRALCTGEKGIGKSGK L+YKGSSFHR+I +FM+Q           GESI+G +F DENF +KH   G LSMANAG +TNGSQFFITT  T  L+G H VFG+V+ G D+V+K+E AE  +S  PK+  VI + G++
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.796e-46
Identity = 93/168 (55.36%), Postives = 118/168 (70.24%), Query Frame = -1
Query:  268 VYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE-PKSKVVISNSGEMA 768
            V+FDI +GG+  GR+   L+   VPKT ENFRALCTGEKG+G+SGK L+YKGS+FHR+I  FM Q           GESI+GE F DE F + H+ P +LSMANAGP+TNGSQFFIT   T  LDG+HVVFG+V+ G  VVR IE     +G+ PK  VVI++ G+++
Sbjct:    7 VFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVIADCGQLS 174          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.796e-46
Identity = 95/151 (62.91%), Postives = 110/151 (72.85%), Query Frame = -1
Query:  268 MGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEMA 720
            M LF   VP+T ENFRALCTGEKG+G   K L+YKGSSFHR+IP FM Q           GESI+G  F DENF  KHTGPGVLSMANAGP TNGSQFFI T  T+WLDG+HVVFG+V+ GMDVVR IE  G QSG+ K  V I++ G+++
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.769e-46
Identity = 99/172 (57.56%), Postives = 115/172 (66.86%), Query Frame = -1
Query:  271 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL--SGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 780
            +T KVYFDI +   P GRI   LF   VPKT ENFRAL TGEKG G       Y GSSFHR+I  FM+Q           G+SI+GE FADENF+LKH   G+LSMANAG +TNGSQFFITTV+T WLDG+HVVFG+V     M +VRKIEA G  SG   +KV I+ SG +
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSAKVTIAESGAL 165          
BLAST of CN184875 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 6.229e-46
Identity = 94/168 (55.95%), Postives = 116/168 (69.05%), Query Frame = -1
Query:  271 KVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKTLYYKGSSFHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISNSGEM 771
            +V+FD+++GG+ +GRIV+ LF   VPKT ENFRALCTGEKG G + GK L++KG  FHRII  FMIQ           GESI+GE F DENF  KH   G+LSMANAGP+TNGSQFFITTV T  LDG+HVVFG+V+ G+ V R +E       +P    VI+  GE+
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVNGEKPAKLCVIAECGEL 184          
The following BLAST results are available for this feature:
BLAST of CN184875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
PPIA_CANAL3.303e-4756.02Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_ASPOR4.314e-4757.49Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIC_MOUSE4.314e-4757.06Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIA_FELCA5.634e-4756.63Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIE_RHIOR7.358e-4758.68Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPID_DICDI9.610e-4756.14Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPID_AMAMU2.796e-4655.36Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
CYPH_ALLCE2.796e-4662.91Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
PPIA_STRCH4.769e-4657.56Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPID_MOUSE6.229e-4655.9540 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184875 ID=CN184875; Name=CN184875; organism=Citrus sinensis; type=EST; length=822bp
GAGGAGTAACTGTGTTCTTACAAGCAAATGCAAGCAATTCCACTATAAAC
AATGAAAAATAATGAAACACAAACTATTCTAGGAATAACAGAGCTATTAC
CAAGCTCGAATCTGTTAAAGACCATTGCAAATTGCAATAAGGAATTAGAG
TTGTTTTTCTACAGACCATATACCAACCCGAATGGATGTGGAACAAAACA
GATAGCACAAATATAGGACAAGTTATCAATTTCCATATAAAAATTTAATA
AGGATGGTCTGTCACAAAGCCATTTCACCACTGTTAGATATAACAACTTT
ACTTTTGGGCTCCCCACTCTGCCTTCCTTCCGCTTCAATTTTGCGGACAA
CGTCCATCCCAGAGAGCACTTTGCCAAACACAACATGGCGGCCATCCAAC
CAGCTAGTTATGACAGTCGTAATGAAGAACTGTGACCCATTGGTGTCTGG
CCCAGCATTTGCCATCGACAGAACTCCTGGTCCAGTGTGCTTCAGTTTAA
AGTTCTCATCAGCAAAACTTTCCCCAAATATTGACTCTCCACCACGCCCA
TCACCAAGAGTAAAATCACCGCCCTGGATCATAAAGCTTGGAATAATCCT
GTGAAATGAGCTCCCTTTATAATAAAGTGTTTTCCCACTCTTCCCAATTC
CTTTCTCCCCTGTGCAGAGTGCTCGGAAGTTTTCTACAGTTTTAGGGACA
GCCTTCCCAAATAGGCCCATAACTATGCGACCAATGGGTTTCCCACCAAC
CTCGATATCAAAGTAAACTTTGTGGGTCACTTTTTCCAATTCCTCTCTTG
AGTTGCCTTCCTGAATGAAAGC
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