CN184869

Overview
NameCN184869
Unique NameCN184869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13033 contig Csv1_Contig13033:36..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184869 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16
Identity = 56/173 (32.37%), Postives = 85/173 (49.13%), Query Frame = -3
Query:  205 ITAKHYNLWYAYA-KTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEETRASGRLICSSSVAHWSQIIEMLKAKYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQMFDDCIKSFRDKGFL 717
            I AK    W  +A K +AEK A   AK   ID + + P  VVGP + P    +L+  L+++ G    Y     G +VH+DD+  AHI   E  +A GR ICSS  A    + +M++ K+P Y   ++    + D    S  + KL ++GF    ++  M+   I + R K  L
Sbjct:  163 IYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPTEFKGIDKDLPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLL 335          
BLAST of CN184869 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.484e-14
Identity = 56/198 (28.28%), Postives = 89/198 (44.95%), Query Frame = -3
Query:  130 ITAKHYNLW-YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT-VGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSQIIEMLKAKYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQMFDDCIKSFRDKGFL*STPPENSSYFVFKQEP*ASKFFNN 717
            I +K    W Y  +K +AEK     AK+  ID + + P  VVGP + P    +L+  L+ + G    Y       +VH+DD+   HI   E  +A GR ICSS  A    I +++   +P Y    +    + D    S  + K+  +GF+   ++  M    I + R+KG L  +   N      ++EP  +   NN
Sbjct:  165 INSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIKQCQYVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFEGIDKDIPVVSFSSKKMIGMGFIFKYTLEDMVRGAIDTCREKGMLPYSTKNNKG---DEKEPILNSLENN 359          
BLAST of CN184869 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = -3
Query:  205 ITAKHYNLW-YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSQIIEMLKAKYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQMFDDCIKSFRDKGFL 717
            I AK    W Y  +K +AEK A   A+   ID + + P  VVGP +      +L+  L+++    G        +VH+DD+  AHI   E  +A GR ICSS  A    + +M++ K+P Y   ++    + D +  S  + KL ++ F    ++  M+   I++ R K  L
Sbjct:  165 IYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPSLITALSLITAHYGIIKQGQ--YVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIYDVAKMVRQKWPEYYVPTEFKGIDKDLALVSFSSKKLMDIKFQFKHTLEDMYKGAIETCRQKQLL 334          
The following BLAST results are available for this feature:
BLAST of CN184869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DFRA_PETHY2.071e-1632.37Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_ANTMA1.484e-1428.28Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_SOLLC2.143e-1329.65Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184869 ID=CN184869; Name=CN184869; organism=Citrus sinensis; type=EST; length=770bp
TTTATAGATGTTGATAGAAATATCGAAGTCATATCATTTGTGTAGCTGGG
GCTCTAAGCCACAAGTGTCACACTATGCCATGACAAAAACCCAAATGCGT
CACGCAAGCTCGGTCCATTTACCTATCATATTATTGAAAAACTTTGAAGC
CTAAGGCTCTTGTTTGAAGACAAAATATGATGAATTTTCTGGTGGAGTGC
TTCATAGAAATCCCTTGTCTCGGAAGCTCTTAATGCAGTCATCAAACATC
TGAGGAACTGATTTGAAACCAACAAAACCCAATTCAAATAATTTACTTGT
GTCCATGCTATGTGGACTGTTGTCTCCTTCTTGCTTGCTACACTTGCTTT
CATAGGGATAGGAGGGATATTTGGCCTTGAGCATTTCGATTATCTGAGAC
CAATGAGCCACAGAGCTTGAACATATAAGTCTCCCAGATGCTCTGGTTTC
CTCCATAGCCAAAATGTGAGCACCCACCACATCATCTATGTGTACAAAAC
CCACCGTTGTGTTTGGATATTCACCTCTCAAACCTTTAACCATGGCCAGT
ATCAGGAGAAGTGTACTGGTTGGTTGGGGTGCAAGCAATGGACCAACGAC
GAAAGATGGGTTCACCACCACCATATCAATGCCGCAATCCTTAGCTATTC
GCCATGCCTCTTTCTCAGCTATAGTCTTTGCATAGGCATACCACAGATTG
TAGTGTTTTGCAGTAATCAGGATCGCTCCAATGTGACTCATTGAGAGGAG
AAACTCGTTGGGCATCATGG
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