CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 260.381 bits (664), Expect = 8.708e-69 Identity = 130/188 (69.15%), Postives = 155/188 (82.45%), Query Frame = -1 Query: 248 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXKEGVPEGLYM 811 SELIQKY GDGP+L R++F+VA + +PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFD RGDVKVI+ATN+IE+LDPAL+RPGRIDRKI F PD+ T+++I IHTS+M L++DVNLE V TKD+ SGADI+A+CTEAGLLALRERRM+VT DF E EGLY+ Sbjct: 250 SELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL 437
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.537e-65 Identity = 123/187 (65.78%), Postives = 151/187 (80.75%), Query Frame = -1 Query: 251 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXKEGVPEGLY 811 +ELIQ+Y G+GPKLVRELFRVAD +PSI+FIDEIDA+G KRY+ SGG RE+QRTMLELLNQLDGFD+R D+KVI+ATN+IE+LDPAL+RPGRIDRKIEF +PD T+++IF IHTSRMTL + VN+E + +K++ SGADIKAICTEAG++ALRERR VT DF ++ V GLY Sbjct: 237 TELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKVFFSKQKMVSAGLY 423
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.628e-65 Identity = 128/186 (68.82%), Postives = 146/186 (78.49%), Query Frame = -1 Query: 257 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD-SRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXKEGVPEG 811 SELIQKY GDGP+LVR+LF A++ SPSIVFIDEIDA+GTKRYDA SG EREIQRTMLELLNQLDGFD S+ D+KVI+ATNRI LDPAL+RPGRIDRKI F PD T+R+IF IHTS+M L +DVNLEE + KD+ SGA+IKAI +EAGLLALRERRM+V DF EG P G Sbjct: 259 SELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDEGGPAG 444
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 7.156e-55 Identity = 102/167 (61.08%), Postives = 134/167 (80.24%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + SP+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF T++M L+++V+LEEFV D SGADI AIC EAG+ A+RE R V DF Sbjct: 230 SEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDF 396
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.594e-54 Identity = 99/167 (59.28%), Postives = 136/167 (81.44%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.594e-54 Identity = 99/167 (59.28%), Postives = 136/167 (81.44%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.594e-54 Identity = 99/167 (59.28%), Postives = 136/167 (81.44%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.594e-54 Identity = 99/167 (59.28%), Postives = 138/167 (82.63%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP+LVR++FR+A + SP+I+FIDEIDA+ TKR+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IFQ+ TS+M L+D+V+LE++V D+ SGA+I++IC EAG+ A+R+ R + DF Sbjct: 218 SEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDF 384
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.594e-54 Identity = 99/167 (59.28%), Postives = 136/167 (81.44%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.719e-54 Identity = 101/166 (60.84%), Postives = 133/166 (80.12%), Query Frame = -1 Query: 314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811 SE +QKY G+GP++VR++FR+A + SPSI+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +F SRM L+DDV+LE++V D+ SGADI +IC EAG+ A+RE R V D Sbjct: 229 SEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKD 394 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |