CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.496e-44 Identity = 86/167 (51.50%), Postives = 119/167 (71.26%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 S +I KY G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH S + +++ E V + F+GAD++ ICTEAG+ A+R R V H DF Sbjct: 207 SAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDF 373
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.953e-44 Identity = 82/167 (49.10%), Postives = 122/167 (73.05%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY GDG KLVRE+F +A +PSI+FIDE+D++ +R + +G +RE+QRT+++LL ++DGFD R ++++I ATNR + LDPA+LRPGR DR + P+P I+ R +I +IH +MTLA D++ ++ + SGAD+KAI TEAG+ A+R+ + V DF Sbjct: 227 SELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDF 393
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.332e-44 Identity = 85/167 (50.90%), Postives = 120/167 (71.86%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 S +I KY G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD+ G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++ ICTEAG+ A+R R V H DF Sbjct: 207 SAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDF 373
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.352e-44 Identity = 81/167 (48.50%), Postives = 122/167 (73.05%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY GDG KLVRE+F +A +PSI+FIDE+D++ +R + +G +RE+QRT+++LL ++DGFD R ++++I ATNR + LDPA+LRPGR DR + P+P I+ R +I +IH +MTLA+D++ ++ + SGAD+KAI TEAG+ A+R + V +F Sbjct: 227 SELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEF 393
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.352e-44 Identity = 88/166 (53.01%), Postives = 119/166 (71.69%), Query Frame = -1 Query: 314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811 SEL+ K+ G+G +LVRE+FR+A + +PSI+FIDEIDA+ +KR D + G+RE+QRTML+LL +LDGFD +VKVI ATNR++ +DPA+LRPGR DR IE PLP ++ R I IHT + +A DV+LE + FSGAD+KA+ EAG A+R +T D Sbjct: 207 SELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDD 372
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.423e-44 Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = -1 Query: 344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808 +L+Q + GDG KLVR+ F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE K EAG++ALR Sbjct: 239 QLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.695e-44 Identity = 86/167 (51.50%), Postives = 119/167 (71.26%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY G+G +LVRELF +A SPSI+FIDEIDA+G R ++++ G+RE+ RT+++LL ++DGF +RGDV++I ATNRI+ LD ALLRPGR DR IE P PDI+ R I IH + M + V++ + D +GAD+++IC EAG+ A+R VT DF Sbjct: 221 SELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDF 387
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.400e-42 Identity = 85/166 (51.20%), Postives = 117/166 (70.48%), Query Frame = -1 Query: 314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811 SE QK+ G+G ++VRE+F +A +PSIVFIDEIDA+G KR D + GEREIQRT+++LL ++DGF +VK+I ATNR++ LDPALLRPGR DR IE PLP+ + R+ IF+I+ +M ++ + + FSGA+IK +CTEAG +A+R R V TD Sbjct: 202 SEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTD 367
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.948e-42 Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 S ++ KY G+ +++RE+F A D P ++F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD+ VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ R + +IH + +T DV+ E D F+ AD++ +CTEAG+ A+R R V DF Sbjct: 205 SAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDF 371
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41 Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 S ++ KY G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD+ VK+I+ATNR ++LDPALLRPGR+DRKI LP+ + R I +IH +T +++ E V D F+GAD++ +CTEAG+ A+R V DF Sbjct: 201 SSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |