CN184861

Overview
NameCN184861
Unique NameCN184861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41
Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = -1
Query:  311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811
            S ++ KY G+  +L+RE+F  A D  P I+F+DEIDA+G +R+   +  +REIQRT++ELLNQ+DGFD+   VK+I+ATNR ++LDPALLRPGR+DRKI   LP+ + R  I +IH   +T   +++ E  V   D F+GAD++ +CTEAG+ A+R     V   DF
Sbjct:  201 SSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41
Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = -1
Query:  311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811
            S ++ KY G+  +L+RE+F  A D  P I+F+DEIDA+G +R+   +  +REIQRT++ELLNQ+DGFD+   VK+I+ATNR ++LDPALLRPGR+DRKI   LP+ + R  I +IH   +T   +++ E  V   D F+GAD++ +CTEAG+ A+R     V   DF
Sbjct:  201 SSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4)

HSP 1 Score: 167.933 bits (424), Expect = 5.882e-41
Identity = 77/166 (46.39%), Postives = 115/166 (69.28%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S ++ KY G+  +++RE+F  A +  P I+F+DE+DA+G +R+   +  +REIQRT++ELL Q+DGFD+ G  K+I+ATNR ++LDPALLRPGR+DRK+E PLP+   R  IF+IHT+++    + + E  V   D F+GADI+   TEAG  A+R+ R  +   D
Sbjct:  249 SGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDD 414          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.003e-40
Identity = 80/167 (47.90%), Postives = 114/167 (68.26%), Query Frame = -1
Query:  311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811
            S ++ KY G+  +L+RE+F  A D  P I+F+DEIDA+G +R+   +  +REIQRT++ELLNQ+DGFD+   VK+I+ATNR ++LDPALLRPGR+DRKI   LP+ + R  I +IH   +T   +++ E  V   D F+GAD+  +CTEAG+ A+R     V   DF
Sbjct:  201 SSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDF 367          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.919e-40
Identity = 76/166 (45.78%), Postives = 116/166 (69.88%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S ++ KY G+  +++RE+F  A +  P ++F+DEIDA+G +R+   +  +REIQRT++ELLNQ+DGFD  G  K+I+ATNR ++LDPALLRPGR+DRKIE PLP+   R  I +IH  +++   +++ E  V   D  +GAD++ + TEAG +A++E R  V  +D
Sbjct:  200 SAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSD 365          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.403e-34
Identity = 74/155 (47.74%), Postives = 108/155 (69.68%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E++ KY+G+  + +RE+F  A + +PSI+FIDEID++  KR +     ER   R + +LL  +DG ++RGDV VI ATNR +++DPAL RPGR DR+IE  +PD + R+ I +IHT +M LA+DV+LEE     + F GAD++A+C EA + ALR
Sbjct:  251 EIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER---RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALR 402          

HSP 2 Score: 146.362 bits (368), Expect = 1.833e-34
Identity = 75/156 (48.08%), Postives = 103/156 (66.03%), Query Frame = -1
Query:  341 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 808
            EL+ K+ G+  K VRE+FR A  ++P ++F DEID++  +R     G     +R + +LL +LDG +   DV VI ATNR + +DPALLRPGR++R I  P PD K R  IF+IH     LADDVN+EE     + +SGADI+A+C EAG+LA+RE
Sbjct:  524 ELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR--GGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRE 677          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.083e-34
Identity = 76/156 (48.72%), Postives = 103/156 (66.03%), Query Frame = -1
Query:  341 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 808
            E+  K+ G+  K +RE+FR A   +P I+F DEIDA+  KR    S    +  + + +LL +LDG +   DV VI ATNR + +DPALLRPGR+DR I  P+PD K R  IF+IHT  M LA+DVNLEE     + ++GADI+A+C EA +LA+RE
Sbjct:  521 EIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTD--KVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRE 674          

HSP 2 Score: 134.42 bits (337), Expect = 7.206e-31
Identity = 73/155 (47.10%), Postives = 100/155 (64.52%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E++ KY G+  + +R++F  A++ +PSI+FIDEIDA+  KR +A    ER   R + +LL  +DG   RG V VI ATNR  +LDPAL RPGR DR+I   +PD + R+ I QIHT  M LA+DV+L+        F GAD+ A+C EA + ALR
Sbjct:  248 EIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER---RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALR 399          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.313e-32
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = -1
Query:  341 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 808
            EL+ KY G+  + VRE FR A  ++PSI+F DE+DA+  +R  +   G     R + +LL ++DG +   DV ++ ATNR + +D AL+RPGRIDR I  PLPD  TRR IF++    M ++++V+L+E ++  D +SGA+I A+C EA LLAL E
Sbjct:  696 ELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGN-VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEE 850          

HSP 2 Score: 103.99 bits (258), Expect = 1.043e-21
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMT-LADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E+I K++G+    +R++F  A    PSI+FIDE+DA+  KR  A +  E+ +  ++L L++ +    S G V V+ ATNR  +LD AL RPGR D++IE  +P+ + R  I Q    R+  L  +  L +   +   + GAD+K +C EAGL ALR
Sbjct:  422 EIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALR 577          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.313e-32
Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E+I KY+G+  + +RE+F  A D SPSI+FIDE+D++  KR D     ER   R + +LL  +DG + RG V VI ATNR++++DPAL RPGR DR+IE  +PD   R  I +IHT  M L+DDVNL         F GADI+++  EA + ALR
Sbjct:  258 EIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVER---RVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALR 409          

HSP 2 Score: 117.857 bits (294), Expect = 6.980e-26
Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = -1
Query:  341 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 808
            +L+ K+ G+  K +R+ FR A  ++P+++F DE+D++   R    +GG    +R + +LL +LDG +   +V VI ATNR + +DPAL+R GR DR ++   P I+ R +I +IHT    LA DV+L E     D + G+D+  I  EA + ALR+
Sbjct:  531 QLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGR--GQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRD 684          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.715e-32
Identity = 71/156 (45.51%), Postives = 103/156 (66.03%), Query Frame = -1
Query:  341 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 808
            EL+ KY G+  + VRE+FR A  ++PSI+F DE+DA+  +R  + SG      R + +LL ++DG +   +V V+ ATNR + +D AL+RPGRIDR I  PLPD  TRR I  +    M ++++V+L+E V+  D +SGA+I A+C EA LLAL E
Sbjct:  696 ELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVER-GSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEE 850          

HSP 2 Score: 104.76 bits (260), Expect = 6.115e-22
Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMT-LADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E+I K++G+    +R++F  A    PSI+FIDE+DA+  KR  A S  E+ +  ++L L++ +    S G V V+ ATNR ++LD AL RPGR D++IE  +P+ + R  I Q    R+  L     L         + GAD+KA+C EAGL ALR
Sbjct:  422 EIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALR 577          
The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
PRS10_MOUSE3.448e-4147.9026S protease regulatory subunit S10B OS=Mus muscul... [more]
PRS10_HUMAN3.448e-4147.9026S protease regulatory subunit S10B OS=Homo sapie... [more]
PRS10_YEAST5.882e-4146.3926S protease subunit RPT4 OS=Saccharomyces cerevis... [more]
PRS10_BOVIN1.003e-4047.9026S protease regulatory subunit S10B OS=Bos taurus... [more]
PRS10_SCHPO2.919e-4045.78Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
Y1297_ARCFU1.403e-3447.74Cell division cycle protein 48 homolog AF_1297 OS=... [more]
Y1156_METJA4.083e-3448.72Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
SPAT5_HUMAN1.313e-3244.87Spermatogenesis-associated protein 5 OS=Homo sapie... [more]
CDCH_HALSA1.313e-3247.74Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
SPAT5_MOUSE1.715e-3245.51Spermatogenesis-associated protein 5 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bp
GAGGGTAATCTTTCATTAGGAATTGGAGAAATGAAGCTAAAAGAGCAACC
AGGATAACAATACCACAACAAAATCTGGAACGGAAAGAAACCAAAGCGGC
TGCTAACTTGCATGTAGACCTTACAAAACAACAGTAAACAACAATGTTTA
AAGTCCAAAAGAAGCCGCTTCGAAAGTGCTAACAGTTGAATTTGGAAATA
CAGCAAAATGAACTAAACAGTAAAATGCAGAACAGTAAAGTCTTTCACAT
ATAAAGCCCTTCTGGCACCCCTTCTTTCTTCTTGAACATCACCTTTTCCT
TTGCTTTCTTAAAATCTGTATGCGTCACCTTCATGCGGCGCTCTCTCAAA
GCAAGCAAACCAGCTTCAGTACATATAGCCTTTATATCAGCTCCAGAGAA
CTCATCTTTGGTCATAACAAACTCTTCCAAGTTGACATCATCAGCCAAGG
TCATCCTTGATGTGTGAATCTGGAAAATACGTCTCCTAGTCTTGATATCG
GGAAGAGGAAATTCAATCTTTCTATCTATTCGACCTGGCCGAAGTAAAGC
TGGATCCAGGCTTTCAATTCGGTTGGTTGCAAGAATTACTTTGACATCTC
CTCTAGAATCAAACCCATCCAACTGGTTCAGCAACTCCAACATGGTTCTC
TGAATTTCACGTTCGCCACCTGAGTGGGCATCATACCTCTTCGTACCAAC
TGCATCAATTTCATCAATGAAGACGATAGAAGGTGACAGATCATCAGCAA
CTCTGAAAAGTTCCCTTACTAATTTTGGTCCATCACCGAAGTACTTCTGA
ATTAATTCACT
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