CN184861

Overview
NameCN184861
Unique NameCN184861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.896e-31
Identity = 71/155 (45.81%), Postives = 104/155 (67.10%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E++ K++G+  + +RE+F+ A++ +PSI+FIDEIDA+  KR D    GE E +R + +LL  +DG   RG V VI ATNR +++DPAL RPGR DR+IE   PD K R+ I Q+HT  M + DDV+L++       ++GAD+ A+  EA + ALR
Sbjct:  281 EIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVT--GEVE-KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALR 432          

HSP 2 Score: 119.783 bits (299), Expect = 1.837e-26
Identity = 63/155 (40.65%), Postives = 96/155 (61.94%), Query Frame = -1
Query:  344 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 808
            E++ K+ G+  K +RE+FR A   +P+++F DEID++   R  +   G  E  R + +LL ++DG      V +I ATNR + LDPALLRPGR DR I  P PD   R  I ++HT  + LA+DV+LE+     + ++GAD++A+  EA + A+R
Sbjct:  556 EILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTE--RIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.225e-31
Identity = 73/167 (43.71%), Postives = 107/167 (64.07%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA-HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S+ I+ + G G   VR+LF+ A + +P I+FIDE+DA+G  R +A HS  ERE  +T+ +LL ++DGFD+   + ++ ATNR + LDPALLRPGR DR++    PD+K R  I +IH   + LA +V+L+        +SGAD+  +  EA LLA+R  R +V  TD
Sbjct:  208 SDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIGKSRLNAIHSNDERE--QTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETD 372          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.225e-31
Identity = 69/163 (42.33%), Postives = 100/163 (61.35%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            SE ++ + G G   VR+LF+ A + +P IVF+DEIDAVG +R     GG  E ++T+ +LL ++DGF+    V V+ ATNR + LD ALLRPGR DR++   +PD+K R  I ++H       +DV+LE   M    FSGAD+  +  EA +LA R  R  ++
Sbjct:  294 SEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSIS 456          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.206e-31
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            SE ++ + G G   VR+LF+ A + SP IVFIDEIDAVG +R     GG  E ++T+ +LL ++DGF+    + +I ATNR++ LD ALLRPGR DR++   +PD+K R  I  +H     L   ++LE        FSGAD+  +  EA +L  R R+ ++T
Sbjct:  240 SEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQIT 402          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.206e-31
Identity = 69/163 (42.33%), Postives = 100/163 (61.35%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            SE ++ + G G   VR+LF+ A + +P IVF+DEIDAVG +R     GG  E ++T+ +LL ++DGF+    + VI ATNR + LD ALLRPGR DR++   +PD++ R  I ++H S      DV+LE   M    FSGAD+  +  EA +LA R  R  ++
Sbjct:  281 SEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAIS 443          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.412e-31
Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            S+ ++ + G G   VR+LF  A   +P I+FIDEIDAVG +R     GG  E ++T+ +LL ++DGF +   + +I ATNR + LDPALLRPGR DR+I+   PD+  R  + ++H     L DDVNL+        FSGAD++ +  EA L+A R    K++
Sbjct:  233 SDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKIS 395          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.412e-31
Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            SE ++ + G G   VR+LF+ A D +P IVFIDEIDAVG +R     GG  E ++T+ +LL ++DGF+    V VI ATNR + LD ALLRPGR DR++   +PD K R  I ++H     +   V+LE        FSGAD+  +  EA +L  R R+  +T ++
Sbjct:  240 SEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSE 405          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.229e-30
Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            SE ++ + G G   VR+LF+ A D +P IVFIDEIDAVG +R     GG  E ++T+ +LL ++DGF+    V VI ATNR + LD ALLRPGR DR++   +PD + R  I ++H     +   V+LE        FSGAD+  +  EA +L  R R+  +T ++
Sbjct:  240 SEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSE 405          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.229e-30
Identity = 75/166 (45.18%), Postives = 98/166 (59.04%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            SE I+ + G G    R+LF  A   SP IVFIDEIDAVG  R     GG  E ++T+ ++L ++DGF     V VI ATNR E LD ALLRPGR DR++   LPDI+ R  I ++H+    L  DV+L    M    FSGAD+  +  EA +LA R  + K+T T+
Sbjct:  291 SEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDKITLTE 456          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.605e-30
Identity = 70/167 (41.92%), Postives = 101/167 (60.48%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S+ ++ + G G   VR+LF  A   +PSI+FIDEIDAVG +R     GG  E ++T+ +LL ++DGF   G+ V VI ATNR + LDPALLRPGR DRK+    PD+K R  + ++H     LA DV+L         + GAD++ +  EA L+A R+ + ++   D
Sbjct:  260 SDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAAD 426          
The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
SAV_SULAC1.896e-3145.81Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
FTSH_TREPA4.225e-3143.71Cell division protease ftsH homolog OS=Treponema p... [more]
FTSH2_ARATH4.225e-3142.33Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_GUITH7.206e-3141.72Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH2_ORYSJ7.206e-3142.33Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_BACPF9.412e-3141.72Cell division protease ftsH homolog OS=Bacillus ps... [more]
FSTH_PORYE9.412e-3142.17Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_PORPU1.229e-3041.57Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH6_ARATH1.229e-3045.18Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_LACLA1.605e-3041.92Cell division protease ftsH homolog OS=Lactococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bp
GAGGGTAATCTTTCATTAGGAATTGGAGAAATGAAGCTAAAAGAGCAACC
AGGATAACAATACCACAACAAAATCTGGAACGGAAAGAAACCAAAGCGGC
TGCTAACTTGCATGTAGACCTTACAAAACAACAGTAAACAACAATGTTTA
AAGTCCAAAAGAAGCCGCTTCGAAAGTGCTAACAGTTGAATTTGGAAATA
CAGCAAAATGAACTAAACAGTAAAATGCAGAACAGTAAAGTCTTTCACAT
ATAAAGCCCTTCTGGCACCCCTTCTTTCTTCTTGAACATCACCTTTTCCT
TTGCTTTCTTAAAATCTGTATGCGTCACCTTCATGCGGCGCTCTCTCAAA
GCAAGCAAACCAGCTTCAGTACATATAGCCTTTATATCAGCTCCAGAGAA
CTCATCTTTGGTCATAACAAACTCTTCCAAGTTGACATCATCAGCCAAGG
TCATCCTTGATGTGTGAATCTGGAAAATACGTCTCCTAGTCTTGATATCG
GGAAGAGGAAATTCAATCTTTCTATCTATTCGACCTGGCCGAAGTAAAGC
TGGATCCAGGCTTTCAATTCGGTTGGTTGCAAGAATTACTTTGACATCTC
CTCTAGAATCAAACCCATCCAACTGGTTCAGCAACTCCAACATGGTTCTC
TGAATTTCACGTTCGCCACCTGAGTGGGCATCATACCTCTTCGTACCAAC
TGCATCAATTTCATCAATGAAGACGATAGAAGGTGACAGATCATCAGCAA
CTCTGAAAAGTTCCCTTACTAATTTTGGTCCATCACCGAAGTACTTCTGA
ATTAATTCACT
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