CN184861

Overview
NameCN184861
Unique NameCN184861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.097e-30
Identity = 69/163 (42.33%), Postives = 102/163 (62.58%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            SE ++ + G G   VR+LF+ A   +P +VFIDEIDAVG +R     GG  E ++T+ +LL ++DGF+    V VI ATNR++ LD ALLRPGR DR+I   +PD+K+R  I ++H ++  L   V+LE        F+GAD+  +  EA +LA+R    ++T
Sbjct:  221 SEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQIT 383          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.097e-30
Identity = 72/164 (43.90%), Postives = 102/164 (62.20%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAH-SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            S+ ++ + G G   VR+LF  A   +P I+FIDEIDAVG  R      GG  E ++T+ +LL ++DGFD+   + VI ATNR + LDPALLRPGR DR+I  P PD++ R  I ++H     LA DV+LE        F+GAD++ +  EA LLA R+ + ++T
Sbjct:  222 SDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEIT 385          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.577e-30
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S+ ++ + G G   VR LF  A   +P+I+FIDEIDAVG +R     GG  E ++T+ +LL ++DGF+    + VI ATNR + LDPALLRPGR DRK+    PD+K R  I ++H     LA+DV+L+        F GAD++ +  EA L+A R  +  +  +D
Sbjct:  254 SDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASD 419          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.577e-30
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S+ ++ + G G   VR LF  A   +P+I+FIDEIDAVG +R     GG  E ++T+ +LL ++DGF+    + VI ATNR + LDPALLRPGR DRK+    PD+K R  I ++H     LA+DV+L+        F GAD++ +  EA L+A R  +  +  +D
Sbjct:  254 SDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASD 419          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.577e-30
Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            SE ++ + G G   VR+LF+ A + +P IVFIDEIDAVG +R     GG  E ++T+ +LL ++DGF     V V+ ATNRI+ LD ALLRPGR DR+I   LP+I  R  I ++H+ +  +  DV LE        FSGAD+  +  EA +L +R  ++++T
Sbjct:  238 SEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEIT 400          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.577e-30
Identity = 67/166 (40.36%), Postives = 100/166 (60.24%), Query Frame = -1
Query:  314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811
            S+ ++ + G G   VR+LF  A   +P ++FIDEIDAVG +R     GG  E ++T+ +LL ++DGF +   + +I ATNR + LDPALLRPGR DR+I    PD+  R  + ++H     L + VNL+   M    FSGAD++ +  EA L+A R+ + K+   D
Sbjct:  228 SDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARD 393          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.101e-30
Identity = 67/163 (41.10%), Postives = 99/163 (60.74%), Query Frame = -1
Query:  323 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 811
            SE ++ + G G   VR+LF+ A + +P IVF+DEIDAVG +R     GG  E ++T+ +LL ++DGF+    V V+ ATNR + LD ALLRPGR DR++   +PD+K R  I ++H+        V+LE   M    FSGAD+  +  EA +LA R  +  ++
Sbjct:  287 SEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAIS 449          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 67/167 (40.12%), Postives = 101/167 (60.48%), Query Frame = -1
Query:  311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811
            S+ ++ + G G   VR++F  A   +P I+FIDEIDAVG +R     GG  E ++T+ ++L ++DGF+    + VI ATNR + LDPALLRPGR DR++   LPD++ R +I ++H  R+ LA D++          FSGAD+  +  EA L A R  +  V+  +F
Sbjct:  219 SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 385          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 67/167 (40.12%), Postives = 101/167 (60.48%), Query Frame = -1
Query:  311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811
            S+ ++ + G G   VR++F  A   +P I+FIDEIDAVG +R     GG  E ++T+ ++L ++DGF+    + VI ATNR + LDPALLRPGR DR++   LPD++ R +I ++H  R+ LA D++          FSGAD+  +  EA L A R  +  V+  +F
Sbjct:  219 SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 385          
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 67/167 (40.12%), Postives = 101/167 (60.48%), Query Frame = -1
Query:  311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811
            S+ ++ + G G   VR++F  A   +P I+FIDEIDAVG +R     GG  E ++T+ ++L ++DGF+    + VI ATNR + LDPALLRPGR DR++   LPD++ R +I ++H  R+ LA D++          FSGAD+  +  EA L A R  +  V+  +F
Sbjct:  219 SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 385          
The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
FTSH_CYAME2.097e-3042.33Cell division protease ftsH homolog OS=Cyanidiosch... [more]
FTSH_AQUAE2.097e-3043.90Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_STRR63.577e-3041.57Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN3.577e-3041.57Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_CYACA3.577e-3042.94Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH_BACSU3.577e-3040.36Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH8_ARATH6.101e-3041.10Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH_SHIFL7.968e-3040.12Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_SALTY7.968e-3040.12Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI7.968e-3040.12Cell division protease ftsH OS=Salmonella typhi GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bp
GAGGGTAATCTTTCATTAGGAATTGGAGAAATGAAGCTAAAAGAGCAACC
AGGATAACAATACCACAACAAAATCTGGAACGGAAAGAAACCAAAGCGGC
TGCTAACTTGCATGTAGACCTTACAAAACAACAGTAAACAACAATGTTTA
AAGTCCAAAAGAAGCCGCTTCGAAAGTGCTAACAGTTGAATTTGGAAATA
CAGCAAAATGAACTAAACAGTAAAATGCAGAACAGTAAAGTCTTTCACAT
ATAAAGCCCTTCTGGCACCCCTTCTTTCTTCTTGAACATCACCTTTTCCT
TTGCTTTCTTAAAATCTGTATGCGTCACCTTCATGCGGCGCTCTCTCAAA
GCAAGCAAACCAGCTTCAGTACATATAGCCTTTATATCAGCTCCAGAGAA
CTCATCTTTGGTCATAACAAACTCTTCCAAGTTGACATCATCAGCCAAGG
TCATCCTTGATGTGTGAATCTGGAAAATACGTCTCCTAGTCTTGATATCG
GGAAGAGGAAATTCAATCTTTCTATCTATTCGACCTGGCCGAAGTAAAGC
TGGATCCAGGCTTTCAATTCGGTTGGTTGCAAGAATTACTTTGACATCTC
CTCTAGAATCAAACCCATCCAACTGGTTCAGCAACTCCAACATGGTTCTC
TGAATTTCACGTTCGCCACCTGAGTGGGCATCATACCTCTTCGTACCAAC
TGCATCAATTTCATCAATGAAGACGATAGAAGGTGACAGATCATCAGCAA
CTCTGAAAAGTTCCCTTACTAATTTTGGTCCATCACCGAAGTACTTCTGA
ATTAATTCACT
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