CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.698e-53 Identity = 94/167 (56.29%), Postives = 135/167 (80.84%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ TS+M L+D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 389
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.748e-53 Identity = 97/167 (58.08%), Postives = 133/167 (79.64%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC G+LA+RE V DF Sbjct: 233 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.949e-52 Identity = 93/167 (55.69%), Postives = 134/167 (80.24%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ T++M L D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 228 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.545e-52 Identity = 95/166 (57.23%), Postives = 127/166 (76.51%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 808 +L+Q + GDG KLVR+ F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 255 QLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 205.682 bits (522), Expect = 2.545e-52 Identity = 95/166 (57.23%), Postives = 127/166 (76.51%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 808 +L+Q + GDG KLVR+ F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 255 QLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.324e-52 Identity = 99/167 (59.28%), Postives = 131/167 (78.44%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+G +LVRE+F++A + +PSI+FIDE+DA+ +R ++ + G+RE+QRTM++LL +LDGFD RGDVKVI ATNRI+ LDPA+LRPGR DR IE PLP + R +IF+IHT +M LA+DV+ +E + SGADIKAICTEAG+ A+RE R KVT DF Sbjct: 209 SEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.324e-52 Identity = 98/166 (59.04%), Postives = 126/166 (75.90%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 808 +L+Q + GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 239 QLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 404
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 3.324e-52 Identity = 98/166 (59.04%), Postives = 126/166 (75.90%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 808 +L+Q + GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +VTH DF Sbjct: 245 QLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 410
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.406e-52 Identity = 95/165 (57.58%), Postives = 126/165 (76.36%), Query Frame = -1 Query: 314 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 808 +L+Q + GDG KLVR+ F +A + +PSI+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D Sbjct: 258 QLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHED 422
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.672e-52 Identity = 94/167 (56.29%), Postives = 131/167 (78.44%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE +QKY G+GP++VR++FR+A + +PSIVFIDE+D++ TKR+DA + +RE+QR ++ELLNQ+DGFD +VKVI+ATNR +++DPALLRPGR+DRKIEFPLPD + +R +F TS+M+L D V++E V ++ S ADI +IC EAG+LA+R R VT DF Sbjct: 202 SEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |