CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.357e-18 Identity = 52/162 (32.10%), Postives = 90/162 (55.56%), Query Frame = -1 Query: 323 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 808 EL+ KY G + VR+LF A P ++F DE D+V +R +G R + ++L Q+DG +S V ++ AT R + +DPALLRPGR+D+ I LP+ + R + Q +R + + L++ D ++ AD+ ++ +A L+A+ + +V+ Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG---VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS 833
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 6.996e-18 Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI-FQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L K+ G+G K+VR LF VA P+++FIDEID++ ++R D R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + + +E+ V D FSGAD+ +C EA L +R Sbjct: 468 SSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIR 621
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX6_KLULA (Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis GN=PEX6 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDI-KTRRRIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLAL 808 EL+ Y G+ VR +F+ A D P ++F DE+D+V KR SGG + R + +LL +LDG S GD V VI ATNR + LD ALLRPGR D+ + + D K + I + T + TL +++ + ++GAD A+C++A L A+ Sbjct: 770 ELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAM 925
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 808 E++ KY G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 289 EILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 808 E++ KY G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 289 EILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 808 E++ KY G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 289 EILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 808 E++ KY G+ +R+LF R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 289 EILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELF-------RVADDLSP-SIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMT----LADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL-------------RERRMKVTHTDF 808 E++ K+ G+ K VR+LF R D S ++ DEIDA+ R G + +LL ++DG ++ +V +I TNR + LD ALLRPGR++ ++E LPD R +I QIHT++M L D+NL+E +SGA+++ + A AL E +K+T DF Sbjct: 286 EVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDF 475
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.193e-17 Identity = 60/160 (37.50%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 338 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF-PLPDIKTRRRIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLALRER 808 ELI Y G + VRE+F A +P I+F DE+D++ R SGG + R + +LL +LDG S DV VI ATNR + LDPALLRPGR D+ + D ++ R+ T + L V+L + + +GAD+ ++C++A + AL+ R Sbjct: 773 ELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMD--RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRR 930
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.193e-17 Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = -1 Query: 338 LIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD--------SRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 805 L K+ G+ ++VR LF +A +PS +FIDEID++ R SG +R ELL Q+DG SR V V+ ATN +D AL R R++++I PLPD ++R+ + I+ + +A DVN+E+ + +SG D+ +C +A + +R + Sbjct: 308 LASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR--GGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRK 467 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |