CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 51/146 (34.93%), Postives = 82/146 (56.16%), Query Frame = -1 Query: 350 GDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLA 787 G G +R+LF A SP +VFIDEID+VG R S +T+ +LL ++DGF S+ + V+ ATN+ E LD ALLRPGR D +I P + R + ++ ++ ++++E+ ++GADI+ + +A + A Sbjct: 241 GLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNR--TFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAA 384
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + S+ ++ L + + +SG+DI A+ +A L +RE Sbjct: 396 ASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRE 550
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17 Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = -1 Query: 314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD--VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDV---NLEEFVMTKDEFSGADIKAICTEAGLLALRE-RRMKVTHTD 811 S L K+ GD K +R LF++A + PSI+FIDEID++ +R S + E+ R M E L Q DG S D + VI ATNR LD A+LR R ++I LPD + R+ + + + D + ++ FS +D+ A+C EA ++ +RE R K++ TD Sbjct: 306 SSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCER----SEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPIREIDRSKLSMTD 472
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17 Identity = 56/159 (35.22%), Postives = 87/159 (54.72%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI-FQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L K+ G+G K+VR LF VA P+++FIDEID++ ++R D R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + D E V D FSGAD+ +C EA L +R Sbjct: 471 SSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIR 624
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17 Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQ-RTMLELLNQLDGFDSRGD----------VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 +E+I G + +RELF A +PSIVFIDEIDA+G+KR + +RE++ R + +LL +DG ++GD V VI ATNR ++LDPAL R GR + +I PD R I + ++ L + + F GAD++++ AG A++ Sbjct: 301 TEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQ----QREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIK 463 HSP 2 Score: 86.6557 bits (213), Expect = 1.723e-16 Identity = 55/158 (34.81%), Postives = 85/158 (53.80%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDE-FSGADIKAICTEAGLLALRE 811 +EL+ KY G+ +R LF+ A +P ++F DE+DA+ T R G ++R + + L +LDG + R +V VI ATNR + +DPA LRPGR + PLP+ R I + + + V+L+ E FSGAD+ + +A A+ E Sbjct: 596 AELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSR---GKEGAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEE 749
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17 Identity = 58/160 (36.25%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + S+ + L + + +SG+DI A+ +A L +RE Sbjct: 393 ASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRE 547
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGF--DSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA L PSI+FIDE+D++ ++R S E E R + E L + DG + GD + V+ ATNR + LD A LR R +++ LP+++TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 557 ASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRE 712
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17 Identity = 59/161 (36.65%), Postives = 94/161 (58.39%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ--IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S L K+ G+G KLVR LF VA PS++FIDEID++ + R ++ R I+ E L QLDG ++ D ++++ ATNR + LD A R R +++ LP+ ++R +I Q + +R + + NLE D +SGAD++ +CTEA + +R+ Sbjct: 383 SSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIK---TEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPESRTQIVQNLLVGTRHDITNH-NLERIRELTDGYSGADMRQLCTEAAMGPIRD 537
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 59/177 (33.33%), Postives = 92/177 (51.98%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD---------VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR-RRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 S L+ KY G+ KLVR LF +A LSPSI+FIDEID++ T R D + R I+ +L + L ++ + V V+ ATN ++D A R R RK+ PLPD +TR + ++ + D++ E + FSG+D+ ++ EA + +R+ K+ DF Sbjct: 538 SSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADF 712
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + + + + L + D +SG+D+ A+ +A L +RE Sbjct: 374 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 528 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |