CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + + + + L + D +SG+D+ A+ +A L +RE Sbjct: 406 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLRERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRE 560
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + + + + L + D +SG+D+ A+ +A L +RE Sbjct: 407 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 561
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + + + + L + D +SG+D+ A+ +A L +RE Sbjct: 409 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 563
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROYA (Spastin OS=Drosophila yakuba GN=spas PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 550 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 550 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 550 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R S E E R + E L + DG D + V+ ATNR + LD A LR R +++ LPD++TR + ++ + + D L + +SG+D+ A+ +A L +RE Sbjct: 574 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRE 729
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 550 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 50/150 (33.33%), Postives = 85/150 (56.67%), Query Frame = -1 Query: 347 GDGPKLVRELFRVADDLS---PSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 787 G+ + +R++F A + + P+++FIDE+DA+ KR ++S E R + +LL +DG DS + + AT+R +++DPAL RPGR DR++ P K R+ I ++ S M DV+ + GAD+ A+C +A + A+ Sbjct: 267 GESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNSAPEN---RVVAQLLTLMDGIDSDNKMVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGADLTALCRDAAMQAV 413
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L K+ G+G K+VR LF VA P+++FIDEID++ ++R D R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + D + V D FSGAD+ +C EA L +R Sbjct: 477 SSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDEETDLVVQQSDGFSGADMTQLCREASLGPIR 630 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |