CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS2_METTH (Putative 26S protease regulatory subunit homolog MTH_1011 OS=Methanobacterium thermoautotrophicum GN=MTH_1011 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 51/145 (35.17%), Postives = 82/145 (56.55%), Query Frame = -1 Query: 380 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVG-TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIK 811 + LI ++ GDG + + EL+ +A +PS++FIDE+DA+G +RY + G ++ + LL ++DG + V I ATN E LD A+ R + +IEF LPD + R+ + + + M L D +++ V E SG DIK Sbjct: 191 TSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRG---DVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDIK 330
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSR----GDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLAL 808 EL+ Y G+ VR +F+ A D P +VF DE+D+V KR + SGG + R + +LL +LDG G V VI ATNR + LDPALLRPGR D+ + + D ++ I + T + TL V+L ++GAD A+C++A L A+ Sbjct: 1059 ELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAV 1217
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF--QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L K+ G+G K+VR LF VA P+++FIDEID++ ++R + R I+ E L QLDG + D ++++ ATNR + +D A R R+ +++ PLP+ R++I + +LA+ +E V+ D FSGAD+ +C EA L +R Sbjct: 450 SSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSRRIK---TEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQ-EVEAIVLQADGFSGADMTQLCREAALGPIR 603
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.723e-16 Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S G+ ++++ ATNR + LD A+LR R +++ LP+ +TR + + S+ + L + D +SG+D+ A+ +A L +RE Sbjct: 406 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALVKDAALGPIRE 560
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.251e-16 Identity = 61/178 (34.27%), Postives = 96/178 (53.93%), Query Frame = -1 Query: 314 ELIQKYFGDGPKLVRELFRVADDL-------SPS-IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL-RERRMKVTHTD 808 E+ K+ G +R +F+ A D SP +V IDEIDA+ R + S G + + L ++DG + ++ I TNR+E LDPA +R GR I+ LPD + R +IFQIHT ++ L+DDV++ + + +EFSGADI+ + A + +L R ++ V + D Sbjct: 641 EIFNKWVGGSESNIRAIFKPAKDAWKKHGDKSPVYMVVIDEIDAMLPSR--SGSDGNPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLERLNKLDVINDD 816
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.251e-16 Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + + + + L + + +SG+D+ A+ +A L +RE Sbjct: 407 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTNGYSGSDLTALAKDAALGPIRE 561
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.251e-16 Identity = 56/162 (34.57%), Postives = 90/162 (55.56%), Query Frame = -1 Query: 362 ELIQKYFGDGPKLVRELFRVADD----LSPS----IVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEA 808 +++ KY G+ VR LF A++ L P+ I+ DEIDA+ +R G + T++ +LL ++DG D ++ VI TNR + +D ALLRPGR++ ++E LP+ + R +I IHT RM + DDV+ +E FSGA+++ + A Sbjct: 289 QILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSV--AGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAA 448
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R S E E R + E L + DG D + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L + +SG+D+ A+ +A L +RE Sbjct: 569 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPIRE 724
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGF--DSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R S E E R + E L + DG + GD + V+ ATNR + LD A LR R +++ LP ++TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 561 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPGVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRE 716
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = -1 Query: 314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD--VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDV---NLEEFVMTKDEFSGADIKAICTEAGLLALRE-RRMKVTHTD 811 S L K+ GD K +R LF++A + PSI+FIDEID++ +R S + E+ R M E L Q DG S D + VI ATNR LD A+LR R ++I LPD + R+ + + + D + ++ FS +D+ A+C EA ++ +RE R K++ TD Sbjct: 336 SSLTSKWVGDSEKTIRGLFQIARNGQPSIIFIDEIDSILCER----SEKDAEVSRRMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLR--RFPKRIMLNLPDTEARKELITNTLKKHDMMDGLSSSDIRYIASNTSGFSNSDLVALCKEAAMVPVREIHRSKLSVTD 502 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |