CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 54/159 (33.96%), Postives = 89/159 (55.97%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI-FQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L K+ G+G K+VR LF VA P+++FIDEID++ ++R + R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + + +E V+ D FSGAD+ +C EA L +R Sbjct: 449 SSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMSKEHCSLTEQEVEAIVLQADGFSGADMTQLCREAALGPIR 602
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSR--GD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLAL 808 EL+ Y G+ VR +F+ A D P ++F DE+D+V KR SGG + R + +LL +LDG GD V V+ ATNR + LD ALLRPGR D+ + + D ++ +I Q T + L V+L T ++GAD A+C++A L A+ Sbjct: 881 ELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGG--VMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAM 1038
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.552e-16 Identity = 58/163 (35.58%), Postives = 91/163 (55.83%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTR----RRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY G+G KLVR LF VA +L PSI+FIDE+D++ ++R D R R E L + DG + + +V++ ATNR + LD A LR R +++ LPD TR ++ + H + ++ AD L+ + +SG+D+ A+ +A L +RE Sbjct: 441 ASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLSERKDNEHEATR---RLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALR--RFTKRVYVTLPDHNTRVILLEKLLKKHNNPLS-AD--KLKYLARLTEGYSGSDLTALAKDAALGPIRE 595
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.552e-16 Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 + L KY GDG KLVR LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A +A L +RE Sbjct: 550 ASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTARPKDAALEPIRE 705
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.552e-16 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = -1 Query: 347 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF---DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLAL 808 EL+ Y G+ VR++F+ A D P +VF DE+D+V KR + E + R + +LL +LDG D V V+ ATNR + LD ALLRPGR D+ + + D ++ +I + + + L V+L++ + F+GAD A+C++A L A+ Sbjct: 887 ELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGN-QGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAM 1044
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PEX6_SCHPO (Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe GN=pex6 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.117e-15 Identity = 52/165 (31.52%), Postives = 91/165 (55.15%), Query Frame = -1 Query: 326 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF--DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL-PDIKTRRRIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLALRERRMKV 808 EL+ Y G+ VR +F A + SP ++F DE+D++ R ++ G + R + +LL +LD D+ V VI ATNR + LDP+LLRPGR D+ + + +++ + + T L + ++L E F+GAD+ A+C++A L A++ + ++ Sbjct: 723 ELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.117e-15 Identity = 53/160 (33.12%), Postives = 86/160 (53.75%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S L K++G+ KL +F +A L PSI+FIDEID+ R S + E M + ++ DG D+ + +VI+ ATNR + LD A+LR R+ + P+++ R+ I ++ + V L E D FSG+D++ +C +A LL +R+ Sbjct: 164 STLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRD 317
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.459e-15 Identity = 52/151 (34.44%), Postives = 87/151 (57.62%), Query Frame = -1 Query: 362 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEA 811 S+L+ K+ G+ +LVR+LF +A + PSI+FIDEID++ R + S R I+ L +N + G D G V V+ ATN +LD A+ R R +++I PLP+ R R+F+++ ++ + + +E D +SG+DI + +A Sbjct: 196 SDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDA 342
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.459e-15 Identity = 53/162 (32.72%), Postives = 90/162 (55.56%), Query Frame = -1 Query: 362 ELIQKYFGDGPKLVRELFRVADD--------LSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEA 808 +++ KY G+ VR+LF A++ I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ ++E LPD R +I +IHT+RM + +V+LE+ FSGA+++ + A Sbjct: 366 QILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQR--GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAA 525
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.905e-15 Identity = 59/194 (30.41%), Postives = 97/194 (50.00%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELFRVADD----LSPS----IVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE---------------RRMKVTHTDF 808 +++ KY G+ +R LF A++ L P+ I+ DEIDA+ R G + T++ +LL ++DG + ++ VI TNR + +D ALLRPGR++ ++E LP+ + R +I IHT RM +A DV+ E FSGA+++ + A A+ +++VT DF Sbjct: 294 QILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSV--AGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADF 485 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |