CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.905e-15 Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGERE-IQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ--IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L K+ GD KLV+ LF VA P+I+FIDE+D++ +KR S E E R E L LDG S +++V++ ATNR + LD A+ R R R++ PLP + R++I + IH + L D + E D +SGAD+ +C A + LR Sbjct: 317 SSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR----SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHNL-DVRQVIELAELTDGYSGADVDTLCRYASMAPLR 470
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 58/167 (34.73%), Postives = 93/167 (55.69%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDE----------FSGADIKAICTEAGLLALRE 811 S+L+ K+ G+ KLV++LF +A + PSI+FIDE+DA+ R + S R I+ +L +N + G DS+G V V+ ATN LD A+ R R +R+I PLPD+ R +F+I +V V+TK++ +SG+DI + +A + +R+ Sbjct: 200 SDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGV-GNDSQG-VLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEI---------NVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S L K++G+ KL +F +A L PSI+FIDEID+ R S + E M + ++ DG D+ +VI+ ATNR + LD A++R R+ + P +K R I ++ + V+L E D FSG+D+K +C +A LL +RE Sbjct: 160 STLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S L K++G+ KL +F +A L PSI+FIDEID+ R S + E M + ++ DG D+ +VI+ ATNR + LD A++R R+ + P +K R I ++ + V+L E D FSG+D+K +C +A LL +RE Sbjct: 160 STLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S L K++G+ KL +F +A L PSI+FIDEID+ R S + E M + ++ DG D+ +VI+ ATNR + LD A++R R+ + P +K R I ++ + V+L E D FSG+D+K +C +A LL +RE Sbjct: 160 STLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 54/171 (31.58%), Postives = 90/171 (52.63%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVG-TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRERRMKVTHTDF 811 + LI ++ GDG + + EL+ +A +PS++FIDE+DA+G +R+ + G ++ + LL ++DG + V I ATN E LD A+ R + +IEF LP RR + + + M L D ++++ V SG DIK + L LA R++ H ++ Sbjct: 191 TSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRG---DVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEY 356
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTL-ADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S ++ K++G+ K+V +F +A+ L P I+FIDEID+ +R S + E+ T+ E + DG + G V +I ATNRI +D A LR R+ ++ LP R +I + L D+ +L+ FSG+D+K +C EA L A +E Sbjct: 160 SSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRER----SSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 48/148 (32.43%), Postives = 75/148 (50.68%), Query Frame = -1 Query: 371 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAIC 811 S L K++G+ KL +F VA P+I+FIDEID+ D S + + DGF S GD +++ ATNR +D A+LR R+ + + P+P+ K R +I + + + VNL E + SG+D+K +C Sbjct: 151 SNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSF---LRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 56/165 (33.94%), Postives = 93/165 (56.36%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVILATNRIE-SLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ------IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S ++ K+ GD KLVR LF +A +PS +F+DE+++V ++R GGE E R M ELL Q+DG D+ +LA + + LD A+LR R++++I LP + R+ + Q ++S + L D++ D +SG+DI+ +C EA + +R+ Sbjct: 325 STIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR-GTGPGGEHEGSRRMKTELLVQMDGLARSDDLVFVLAASNLPWELDYAMLR--RLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRPVRK 486
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15 Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT-SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S+L+ K+ G+ KLV+ LF++A + PSI+FIDEID++ R + S R I+ E L Q+ G D + V+ ATN LD A+ R R +++I PLP+ R +F++H S + + +E D +SGADI I +A + +R+ Sbjct: 202 SDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK---TEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |