CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.005e-14 Identity = 51/157 (32.48%), Postives = 90/157 (57.32%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT-SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S+++ K+ GD KLV++LF +A + + S++FIDE+D++ + R D S R I+ L +N + G DS G + V+ ATN LD A+ R R +++I LP+ + R ++FQIH S + ++ + +SG+DI ++ +A + +R Sbjct: 202 SDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLCSSRNDQESESARRIKTEFLIQMNGV-GNDSDG-ILVLAATNIPWGLDLAIRR--RFEKRIYIGLPEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVR 354
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 8.005e-14 Identity = 59/166 (35.54%), Postives = 95/166 (57.23%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGERE-IQRTMLELLNQLDGFDSRGDVKVILATNRIE-SLDPALLRPGRIDRKIEFPLPDIKTRRRIF-----QIHTSRMTLADDVNLEEFVMTKDE--FSGADIKAICTEAGLLALRE 811 S ++ K+ GD KLVR LF +A +PS +F+DE+++V ++R A SGGE E R ELL Q+DG D+ +LA + + LD A+LR R++++I LP + R+ + + SR L LE V++++ +SG+DIK +C EA + +R+ Sbjct: 321 STIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTA-SGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSREARQAMIYHWLPPVSKSR-ALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 482
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 46/157 (29.30%), Postives = 82/157 (52.23%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 811 S L K++G+ KL +F +A + P I+F+DEID+ R ++ + L + LD ++ V V+ ATNR + +D A+LR R+ LP+ R I ++ S L++ +NL+E + +SG+D+K +C +A + +R+ Sbjct: 163 STLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGEN-SQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRD 316
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: YCF46_GUITH (Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = -1 Query: 335 GDGPKLVRELFRVADDLSPSIVFIDEIDAVGT-KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMT--KDEFSGADIKAICTEAGLLALRERR 787 G+ VR++ + A+ +SP I++IDEID T ++ SG + + T + L++ + V V+ N I+SL P LLR GR D LPD+K R IF++H ++ + +++ + FSGA+I+ EA +A E R Sbjct: 317 GESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLSE-----KKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIYEAMHIAFNENR 465
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13 Identity = 43/117 (36.75%), Postives = 75/117 (64.10%), Query Frame = -1 Query: 473 ELIQKYFGDGPKLVRELFR----VADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF 808 EL+ K+ G+ + +R +F+ A + +P IVF DE+D++ R SG +++ T++ +LL+++DG + +V VI A+NR + +DPA+LRPGR+D KI+ PD ++ + IF Sbjct: 318 ELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTR---GSGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDIF 431
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.510e-12 Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = -1 Query: 341 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIE-SLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIH-----TSRMTLADDVNLEEFVMTKDE--FSGADIKAICTEAGLLALRE 811 S ++ K+ GD KLVR LF +A +PS +F+DE+++V ++R G R ELL Q+DG D+ +LA + + LD A+LR R++++I LP + R+ + H + L LE V++++ +SG+DIK +C EA + +R+ Sbjct: 322 STIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSQEARQAMI-YHWLPPVSKNHALELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVRK 483
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = -1 Query: 341 LIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 805 L K+FG+ KLV LF +A L P+I+FIDEID +R +I+ + + + L SR V V+ ATNR +D A+ R R+ + PLP+ + RR+I +++ ++ L + + V SG+ IK +C A + RE Sbjct: 161 LTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVPRRE 311
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.575e-12 Identity = 44/135 (32.59%), Postives = 80/135 (59.26%), Query Frame = -1 Query: 419 ELIQKYFGDGPKLVRELFR----VADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEF 808 EL+ K+ G+ + +R +F+ A + +P IVF DE+D++ R +G +++ T++ +LL+++DG + +V VI A+NR + +DPA+LRPGR+D KI+ PD + + I+ + + +L EF Sbjct: 336 ELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEF 467
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.575e-12 Identity = 44/135 (32.59%), Postives = 80/135 (59.26%), Query Frame = -1 Query: 419 ELIQKYFGDGPKLVRELFR----VADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEF 808 EL+ K+ G+ + +R +F+ A + +P IVF DE+D++ R +G +++ T++ +LL+++DG + +V VI A+NR + +DPA+LRPGR+D KI+ PD + + I+ + + +L EF Sbjct: 336 ELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR---GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEF 467
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.363e-12 Identity = 56/167 (33.53%), Postives = 85/167 (50.90%), Query Frame = -1 Query: 344 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---------VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR-RRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 811 S L KY GD KLVR LF VA + S++F+DEID++ + R D SG E E R + E L Q + V V+ ATN +D A R R ++ PLP+ +TR + + + +++ + +LEE V + +SG+DI A+ +A + LR Sbjct: 446 SSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLR 608 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |