CN184861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.493e-49 Identity = 94/167 (56.29%), Postives = 128/167 (76.65%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QK+ G+G ++VRELF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LD ALLRPGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.493e-49 Identity = 94/167 (56.29%), Postives = 128/167 (76.65%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QK+ G+G ++VRELF +A + +PSI+F+DEID++G+ R + SGG+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LD ALLRPGRIDRKIEFP P+ + R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 217 SELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.868e-49 Identity = 95/168 (56.55%), Postives = 128/168 (76.19%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY G+G ++VRELF +A + +PSI+F+DEID++G+ R D+ G G+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LDPALLRPGRIDRKIEFP P + R I +IH+ M L ++L+ + SGA++K +CTEAG+ ALRERR+ VT DF Sbjct: 213 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.664e-49 Identity = 90/167 (53.89%), Postives = 124/167 (74.25%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY G+G ++VR+LF++A I+F DE+DA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG++KV++ATNR ++LDPALLRPGR+DRK+EF LPD++ R IF IH M+ A D+ E +GADI+++CTEAG+ A+R RR V+ DF Sbjct: 238 SELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDF 404
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.307e-48 Identity = 90/167 (53.89%), Postives = 125/167 (74.85%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+ K+ G+G KLVR+LF+VA D P++VFIDEIDA+ +KR D+ + G+ E+QRTM++LL+++DGFD RGD+++I ATNR + LD A+LRPGR DR IE P P++ R +IF+IHT M +AD V+ E + SGAD+KAICTEAG+ A+R+ R +V DF Sbjct: 217 SELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDF 383
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.307e-48 Identity = 98/167 (58.68%), Postives = 126/167 (75.45%), Query Frame = -1 Query: 314 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA-HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTD 811 SEL+QKY G+G K+VRELF +A + +PSI+F+DEID++G+ R + GG+ E+QRTMLELLNQLDGF+S ++K+I+ATNRI+ LDPALLRPGRIDRKIEFP P+ R I +IH+ RM L +NL + SGA+IKA CTEAG+ ALRERR+ VT D Sbjct: 224 SELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQED 390
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.230e-48 Identity = 90/167 (53.89%), Postives = 126/167 (75.45%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY G+G ++VRELF +A + SPSI+FIDEID++G KR D+ + G+RE+QRT+++LL ++DGFD RG+V+++ ATNR + LDPALLRPGR DR I+ P+P + R +I +IH +M LADDV+L + + DE SGAD+ AI EAG+ A+R R V +DF Sbjct: 227 SELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDF 393
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.912e-48 Identity = 94/167 (56.29%), Postives = 126/167 (75.45%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SE ++KY G+G +LVR +F +A + SPSI+FIDEIDAV KR + + G+RE+QRT+++LL +LDGF+SRG+V ++ ATNR + LDPALLRPGR DR IE PLP+ RR I +IHTS M LA++V++E D SGAD+KAICTEAG+ A+R+ R +VT DF Sbjct: 219 SEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.803e-48 Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = -1 Query: 311 SELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 811 SEL+QKY G+G +LVRELF +A +PSI+FIDEIDA+G R D+ + G+RE+QRT+++LL ++DGFD+RGDVK++ ATNRI+ LD ALLRPGR DR IE PLPD + R I +IHT M + +DVNL E + +GAD++AIC EAG+ A+R R V DF Sbjct: 221 SELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDF 387
BLAST of CN184861 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.803e-48 Identity = 95/166 (57.23%), Postives = 125/166 (75.30%), Query Frame = -1 Query: 311 ELIQKYFGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 808 EL+QK+ G+G +LVRELF +A + +PSI+FIDEIDA+G +R + G+RE+QRT+ +LL ++DGFD D+KVI ATNR + LDPALLRPGR DR I+ PLPD + R IF+IHT M LA+DV+L++ + SGADIKAICTEAG++A+RE R VT DF Sbjct: 248 ELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDF 413 The following BLAST results are available for this feature:
BLAST of CN184861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184861 ID=CN184861; Name=CN184861; organism=Citrus sinensis; type=EST; length=811bpback to top |