CN184846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34 Identity = 71/162 (43.83%), Postives = 102/162 (62.96%), Query Frame = 3 Query: 117 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++ Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAIT 180
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB9_BOVIN (Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.113e-34 Identity = 70/162 (43.21%), Postives = 103/162 (63.58%), Query Frame = 3 Query: 117 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++Y SGSAAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ EGG++YG + G +I QPFAI Y+YG+ D A+K GM+ EE + A++ Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGT-MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIA 180
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB6_ENCCU (Probable proteasome subunit beta type-6 OS=Encephalitozoon cuniculi GN=PRE3 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.208e-31 Identity = 68/168 (40.48%), Postives = 107/168 (63.69%), Query Frame = 3 Query: 99 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 N GTTII + Y+ GV++GADSRTS G YV++R +DK+TQ+TD +++CRSGS+AD+Q +S Y+R +L ++ V+ AA L + Y N + L G+IV G+D + +++ + LGG++ E+ +AI ++YG+ D W+ GM+ EE + V AVS Sbjct: 4 NEKEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD--DKPRVFNISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVS 168
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21 Identity = 57/177 (32.20%), Postives = 95/177 (53.67%), Query Frame = 3 Query: 72 KMDLKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 K L+M+ F GTTI+GV Y GGVVLGAD+R + G VA++ +KI + DN+Y C +G+AAD+++ + + L H + G+ V A +++ + + + + +I+GG D G ++ + G+ + P+ F+ +K MTKEEA LV +A+S Sbjct: 22 KTGLRMKGFM---KTGTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISAALILGGID-INGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAIS 194
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 7.445e-20 Identity = 57/182 (31.32%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 60 CFRGKMDLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 599 C R M L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C +G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G ++ + G+ PFA F+ +KEG+T++E +LV +A+ Sbjct: 19 CKRNDM-LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAI 198
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.166e-19 Identity = 56/182 (30.77%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 60 CFRGKMDLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 599 C R M L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C +G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G ++ + G+ PFA F+ +KEG+T++E +LV +++ Sbjct: 19 CKRNDM-LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESI 198
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 47/162 (29.01%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 117 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA+QLV +A++ Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIA 203
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.552e-17 Identity = 49/177 (27.68%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 78 DLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA++LV +A++ Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIA 203
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.552e-17 Identity = 49/177 (27.68%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 78 DLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA++LV +A++ Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIA 203
BLAST of CN184846 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.027e-17 Identity = 46/162 (28.40%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 117 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 602 GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA++LV +A++ Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIA 203 The following BLAST results are available for this feature:
BLAST of CN184846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184846 ID=CN184846; Name=CN184846; organism=Citrus sinensis; type=EST; length=604bpback to top |