CN184836

Overview
NameCN184836
Unique NameCN184836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31
Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 1
Query:  214 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTL--LQKDVKWPLGWPIGG 609
            +IIAEY+WI G+G ++RSK RTL   ++   +LP+WN+DGSST QAPG DS++ L P A + DPFRRG+NI+V+   Y   G P   N RH AAK+F +H D   EE W+G+EQEYTL  +  DV    GWP GG
Sbjct:   23 RIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKD---EEIWFGLEQEYTLFDMYDDV---YGWPKGG 150          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31
Identity = 71/138 (51.45%), Postives = 88/138 (63.77%), Query Frame = 1
Query:  217 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            I+AEYIWI G+   +RSK +TL    S    LP+WN+DGSSTGQAPGEDS++ L P AIF DPFR G+NILV+ + +   G P   N RH  AKI  +H D   ++PW+G+EQEYTL       P GWP GG     G
Sbjct:   26 ILAEYIWIDGAN-GVRSKTKTLFKKPSSVEDLPEWNFDGSSTGQAPGEDSDIYLRPVAIFPDPFRMGDNILVLAECWNADGSPNKFNHRHECAKIMEAHKD---QKPWFGLEQEYTLFDLYGN-PYGWPKGGFPGPQG 158          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.191e-30
Identity = 69/138 (50.00%), Postives = 87/138 (63.04%), Query Frame = 1
Query:  217 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            IIAEY+WI   G  +RSK RTL   V+    LP+WN+DGSSTGQAPG DS++ L P A + DPFRRG+NI+V+ + +   G P   N RH AAK+F +H D    E W+G+EQEYTL  +      GWP GG     G
Sbjct:   26 IIAEYVWIDSEG-GLRSKGRTLNKKVTSVDSLPEWNFDGSSTGQAPGHDSDIYLKPVAFYPDPFRRGDNIVVLAECWNNDGTPNKFNHRHEAAKLFEAHKDA---EMWFGLEQEYTLFDQ-YDQVYGWPKGGFPAPQG 158          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30
Identity = 73/141 (51.77%), Postives = 91/141 (64.54%), Query Frame = 1
Query:  214 KIIAEYIWIGGSGMDMRSKARTLPGPVSD--PSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            ++IAEYIWI   G   RSK+RTLP   S   P +LP WN+DGSSTGQAPGE+S+V L P A+F DPFR   NILV+ + +   G P   N RH AAK+  +H+D V   PW+G+EQEYTLL  + + P GWP  G     G
Sbjct:   25 QLIAEYIWIDSEG-GTRSKSRTLPEKESQYLPEELPIWNFDGSSTGQAPGENSDVYLKPVAVFPDPFRGSPNILVLSECWNADGTPNKFNHRHEAAKLMEAHADQV---PWFGLEQEYTLLDINDR-PYGWPRNGFPAPQG 160          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30
Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = 1
Query:  214 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGG 609
            K+IAEY+W+ G+G ++RSKARTL   ++   +LP+WN+DGSST QAPG DS++ L P A + DPFRRG+NI V+ + +   G P   N RH A K+F +H D   EE W+GIEQEYTL          WP GG
Sbjct:   23 KVIAEYVWVDGTG-NLRSKARTLNKVITSIEQLPEWNFDGSSTNQAPGYDSDIYLKPVAFYPDPFRRGDNITVLAECFNSDGTPNKFNHRHEANKLFQAHKD---EEIWFGIEQEYTLFDM-YDNVYAWPKGG 150          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_COLGL (Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29
Identity = 68/137 (49.64%), Postives = 83/137 (60.58%), Query Frame = 1
Query:  217 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            I+AEYIWI   G + RSK+RTL      P  LP WN+DGSSTGQAPG++S+V L P A+F DPFR   NILV+ + +   G P   N RH  AK+       A EPW+G+EQEYTLL    + P GWP  G     G
Sbjct:   26 IMAEYIWIDADG-ETRSKSRTLKEKEYTPEDLPMWNFDGSSTGQAPGDNSDVYLKPVAVFPDPFRGSPNILVLSECWNADGTPNKYNYRHECAKLMEAH--AAHEPWFGLEQEYTLLDLSNR-PFGWPANGFPAPQG 158          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29
Identity = 68/138 (49.28%), Postives = 88/138 (63.77%), Query Frame = 1
Query:  217 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            +IAEYIW+  +G  +RSK RTL   V    +LP+WN+DGSSTGQAPG DS+V L P A + DPFRRG+NI+V+ + +   G P   N RH AAK+F +H    A + W+G+EQEYTL   +     GWP GG     G
Sbjct:   23 VIAEYIWVDSAG-HLRSKGRTLQRRVESVDELPEWNFDGSSTGQAPGHDSDVYLKPVAFYPDPFRRGDNIIVLAECWNNDGTPNKYNHRHEAAKLFEAHR---AADIWFGLEQEYTLFDHNDN-VYGWPKGGFPAPQG 155          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29
Identity = 68/140 (48.57%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  211 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            DK+ AEY+WI G G  +RSK  T+    +D  +L  W++DGSST QAPG DS+V L P AIFKDPFR G+NILV+ + +   G P  TN RH   K+    D+  +  PW+G+EQEYTL   D   P GWP GG     G
Sbjct:   20 DKVQAEYVWIDGDG-GLRSKTMTMTKKTTDIGQLRIWDFDGSSTNQAPGGDSDVYLRPAAIFKDPFRGGDNILVLAETFNNDGTPNRTNHRHHTKKVM---DLAKDSVPWFGLEQEYTLFDAD-GTPFGWPKGGFPGPQG 154          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_DEBHA (Glutamine synthetase OS=Debaryomyces hansenii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29
Identity = 66/139 (47.48%), Postives = 88/139 (63.31%), Query Frame = 1
Query:  214 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            K++AEY+WI   G + RSK +TL    S    LP+WN+DGSSTGQAPG DS+V L P A + DPFR+G+NI+V+ + +   G P   N RH +AK+  +H+D   EE W+G+EQEYTL  +    P  WP GG     G
Sbjct:   22 KVLAEYVWIDADG-NSRSKCKTLDKKPSSVEDLPEWNFDGSSTGQAPGHDSDVYLRPVAFYADPFRKGDNIIVLTECWNNDGTPNKFNHRHESAKLMKAHAD---EEVWFGLEQEYTLFDQ-FDQPYAWPKGGFPAPQG 155          
BLAST of CN184836 vs. ExPASy Swiss-Prot
Match: GLNA_AMAMU (Glutamine synthetase OS=Amanita muscaria GN=GLN1 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29
Identity = 70/138 (50.72%), Postives = 84/138 (60.87%), Query Frame = 1
Query:  214 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLGWPIGGLSWASG 627
            K  AEY+WI G G  +RSK  T+   V+D S+L  W++DGSST QAP  +S+V L P AIFKDPFR G NILV+ + Y   G P  TN RH  AK+   +    E PW+GIEQEYTL   D   P GWP GG     G
Sbjct:   21 KFHAEYVWIDGDG-GLRSKTTTVDQKVTDISQLRVWDFDGSSTNQAPSGNSDVYLRPSAIFKDPFRGGENILVLSETYNNDGTPNRTNHRHHTAKVMELAK--DEIPWFGIEQEYTLFDADGS-PYGWPKGGFPGPQG 154          
The following BLAST results are available for this feature:
BLAST of CN184836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GLNA_YEAST3.381e-3152.59Glutamine synthetase OS=Saccharomyces cerevisiae G... [more]
GLNA_TUBBO5.767e-3151.45Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2... [more]
GLNA_KLULA2.191e-3050.00Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_NEUCR2.862e-3051.77Glutamine synthetase OS=Neurospora crassa GN=gln-1... [more]
GLNA_CANGA8.327e-3050.38Glutamine synthetase OS=Candida glabrata GN=GLN1 P... [more]
GLNA_COLGL1.088e-2949.64Glutamine synthetase OS=Colletotrichum gloeosporio... [more]
GLNA_ASHGO1.088e-2949.28Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE... [more]
GLNA_SUIBO1.420e-2948.57Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_DEBHA1.420e-2947.48Glutamine synthetase OS=Debaryomyces hansenii GN=G... [more]
GLNA_AMAMU1.420e-2950.72Glutamine synthetase OS=Amanita muscaria GN=GLN1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184836 ID=CN184836; Name=CN184836; organism=Citrus sinensis; type=EST; length=709bp
GAGGCTTTTTTATTGTCAACACTGCGAAACCGCACTATAAAAGCCAGGCA
ACAACAGCCTCCTCCGTTCACGTCTCTGTGTAGCACATTAACATCCCTTC
AATCACAGTAATCTCATTACCAGTTTCTTTGTTGTGTTAAGAGACTAAAG
AGTCTTCGAAACATGTCTCTGCTCTCAGATCTCCTTAACCTTAACCTCTC
AGAATCCACTGACAAGATCATCGCTGAGTACATATGGATCGGTGGATCTG
GCATGGACATGAGGAGCAAAGCAAGGACTCTTCCCGGTCCCGTTAGTGAT
CCTTCCAAGCTGCCTAAGTGGAATTATGATGGTTCCAGCACAGGCCAAGC
ACCTGGAGAAGATAGTGAAGTGATCCTCTATCCTCAAGCTATTTTCAAGG
ATCCATTCAGGAGAGGCAACAATATTCTTGTTATGTGTGATGCTTACACT
CCTGCGGGGGAACCAATTCCAACAAACAAAAGACATGCAGCTGCCAAGAT
TTTCAGCCATTCTGACGTTGTGGCTGAAGAACCATGGTATGGTATTGAGC
AGGAATACACCTTACTGCAGAAGGATGTTAAATGGCCTCTTGGCTGGCCC
ATCGGTGGGTTATCCTGGGCCTCAGGGACCATACTACTGTGGTGTTGGTG
CTGACAAAGCTTGGGGGGCGCGACATTGTAGAACTCCCATTTACAAGGCC
TGTCTATAT
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