DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_DICDI (Fumarate hydratase, mitochondrial OS=Dictyostelium discoideum GN=fumH PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 78/121 (64.46%), Postives = 94/121 (77.69%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN+ +++ GSNGHFELNVFKP+I +L S+RL+ DAS SF K+CV GI+A+ +RI +LLHESLMLVT+LNP IGYD AA AKKAHKE TTLK+A L LG SEEFD V P KMIG Sbjct: 362 MGNNTTVSIAGSNGHFELNVFKPVIIKNVLSSIRLIADASVSFTKHCVVGIKADEKRIDQLLHESLMLVTALNPYIGYDKAAKAAKKAHKEKTTLKEACLSLGFTTSEEFDKWVDPSKMIG 482
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_CAEEL (Probable fumarate hydratase, mitochondrial OS=Caenorhabditis elegans GN=fum-1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 75/122 (61.48%), Postives = 94/122 (77.05%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN VA++VGGSNGHFELNVFKP+I +L S RLL D++ SF +CV GI AN++ I+K++ ESLMLVT+LNP IGYDNAA +AK AHK GTTL A+KLG+L E+F V PE M+GP Sbjct: 379 MGNQVAVSVGGSNGHFELNVFKPLIVRNVLQSTRLLADSAVSFTDHCVDGIVANKDNIAKIMRESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLVQEAVKLGILTEEQFAQWVKPENMLGP 500
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_LEPIN (Fumarate hydratase class II OS=Leptospira interrogans GN=fumC PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 73/123 (59.35%), Postives = 101/123 (82.11%), Query Frame = -3 Query: 325 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 693 I N VA+ +GG++G+FELNVFKP+I +L+S+RLL D+ SFE++C RGI N+E++++ L+ SLMLVT+LNP IGYDNAA +AK AHK+GTTLK++ ++LG+L SE+FD V+PEKMI PS Sbjct: 340 IANDVAVNIGGASGNFELNVFKPLIIHNVLNSIRLLSDSCVSFEEHCARGIIPNKEKLNEHLNNSLMLVTALNPHIGYDNAAKIAKNAHKKGTTLKESGIELGLLTSEQFDQWVLPEKMIHPS 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_LEPIC (Fumarate hydratase class II OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=fumC PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 73/123 (59.35%), Postives = 101/123 (82.11%), Query Frame = -3 Query: 325 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 693 I N VA+ +GG++G+FELNVFKP+I +L+S+RLL D+ SFE++C RGI N+E++++ L+ SLMLVT+LNP IGYDNAA +AK AHK+GTTLK++ ++LG+L SE+FD V+PEKMI PS Sbjct: 340 IANDVAVNIGGASGNFELNVFKPLIIHNVLNSIRLLSDSCVSFEEHCARGIIPNKEKLNEHLNNSLMLVTALNPHIGYDNAAKIAKNAHKKGTTLKESGIELGLLTSEQFDQWVLPEKMIHPS 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RICFE (Fumarate hydratase class II OS=Rickettsia felis GN=fumC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.747e-37 Identity = 74/121 (61.16%), Postives = 94/121 (77.69%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GNHV +T+ GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N RI+ L +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEFD +VVPEKMIG Sbjct: 341 MGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFDKIVVPEKMIG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_YEAST (Fumarate hydratase, mitochondrial OS=Saccharomyces cerevisiae GN=FUM1 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 8.812e-37 Identity = 76/122 (62.30%), Postives = 97/122 (79.51%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN+ AIT GS G FELNVFKP++ + LL+S+RL+ DA+ SF +CV GI+AN RI +LL +SLMLVT+LNPKIGYD A+ VAK AHK+G TLK++AL+LGVL +EFD VVPE M+GP Sbjct: 366 MGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGP 487
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RALSO (Fumarate hydratase class II OS=Ralstonia solanacearum GN=fumC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36 Identity = 72/120 (60.00%), Postives = 94/120 (78.33%), Query Frame = -3 Query: 331 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 690 GN VA+ +GG++G+FELNVF+PMIA LHS RLL D SF +C GI+ NRERI++L+ SLMLVT+LNP IGYD +A +AKKAHKEGT+L++AAL LG + +E+FD V PE+M+G Sbjct: 341 GNDVAVNIGGASGNFELNVFRPMIAYNFLHSARLLADGMRSFNDHCAVGIEPNRERIAELVQRSLMLVTALNPHIGYDKSAQIAKKAHKEGTSLREAALALGYVTAEQFDAWVRPEQMVG 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_SHIFL (Fumarate hydratase class II OS=Shigella flexneri GN=fumC PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNVF+PM+ L S+RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK AAL LG L+ EFD+ V PE+M+G Sbjct: 341 MGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_ECOLI (Fumarate hydratase class II OS=Escherichia coli (strain K12) GN=fumC PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNVF+PM+ L S+RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK AAL LG L+ EFD+ V PE+M+G Sbjct: 341 MGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_ECO57 (Fumarate hydratase class II OS=Escherichia coli O157:H7 GN=fumC PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNVF+PM+ L S+RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK AAL LG L+ EFD+ V PE+M+G Sbjct: 341 MGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVG 461 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |