DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_METEA (Fumarate hydratase class II OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=fumC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = -3 Query: 325 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 693 +GN ++ GS GHFELNVFKP+IA+ +L S+R+L DAS SF NCV GI+AN +RIS L+ SLMLVT+L P IGYD AA +AK AHK GTTLK+ AL+LG + EEF+ +V PE M+ PS Sbjct: 348 VGNGTTVSFAGSQGHFELNVFKPVIANAVLQSVRILADASVSFTDNCVVGIKANTDRISDLMSRSLMLVTALAPSIGYDKAAEIAKTAHKNGTTLKEEALRLGYVTDEEFERVVRPETMLAPS 470
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_ECOL6 (Fumarate hydratase class II OS=Escherichia coli O6 GN=fumC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 75/121 (61.98%), Postives = 93/121 (76.86%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNVF+PM+ L S+RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK AAL LG L+ EFD V PE+M+G Sbjct: 341 MGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDRWVRPEQMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_PHOLL (Fumarate hydratase class II OS=Photorhabdus luminescens subsp. laumondii GN=fumC PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 72/121 (59.50%), Postives = 93/121 (76.86%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNVF+PM+ + L S+RLL D SF ++C GI+ NR+RI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK +A+KLG L EFD V PE M+G Sbjct: 341 MGNDVAINIGGASGNFELNVFRPMVINNFLQSVRLLADGMRSFNEHCAVGIEPNRDRITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKQSAMKLGYLTEAEFDEWVRPEDMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RICBR (Fumarate hydratase class II OS=Rickettsia bellii (strain RML369-C) GN=fumC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.662e-35 Identity = 73/123 (59.35%), Postives = 93/123 (75.61%), Query Frame = -3 Query: 325 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 693 +GNHV +T+ GSNGH ELNVFKP+I +L S+ LL DA+ SF +CV GI+ N I+ L +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEF+ +VVPEKM+ S Sbjct: 341 MGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDAANSFVTHCVDGIEPNITHINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFNKIVVPEKMVRQS 463
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RICPR (Fumarate hydratase class II OS=Rickettsia prowazekii GN=fumC PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.171e-35 Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 +GNHV +T+ GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N RI+ L +SLMLVT LNP IGYDNAA +AK+AHK G TLK+AA KL L+ EEFD +VVPEKMI Sbjct: 341 MGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMI 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RICTY (Fumarate hydratase class II OS=Rickettsia typhi GN=fumC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35 Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 +GNHV +T+ GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N ERI+ L +SLMLVT LNP IGYDNAA +AK+A+K G TLK+AA KL L+ EEFD +V+PEKMI Sbjct: 341 MGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIERINALRDKSLMLVTVLNPHIGYDNAAKIAKEAYKYGITLKEAAKKLNFLSEEEFDKIVIPEKMI 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RICCN (Fumarate hydratase class II OS=Rickettsia conorii GN=fumC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35 Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = -3 Query: 325 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 693 +GNHV +T+ GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N RI+ L +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ +FD +VVPEKM+ S Sbjct: 341 MGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEAKFDKIVVPEKMVSQS 463
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_SALTY (Fumarate hydratase class II OS=Salmonella typhimurium GN=fumC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.315e-35 Identity = 72/121 (59.50%), Postives = 93/121 (76.86%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNV++PM+ L ++RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK +A+ LG L+ EEFD V PE M+G Sbjct: 341 MGNDVAINMGGASGNFELNVYRPMVIHNFLQTVRLLADGMESFNKHCASGIEPNRERITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDEEFDAWVRPELMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_HELPY (Fumarate hydratase class II OS=Helicobacter pylori GN=fumC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.315e-35 Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN AI + S G+FELNVFKP+I L SLRLL D+ SF +C GI+ NRE+I LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD VVPEKMIGP Sbjct: 340 MGNDTAIGIAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNREKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDKFVVPEKMIGP 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_HELPJ (Fumarate hydratase class II OS=Helicobacter pylori J99 GN=fumC PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.407e-34 Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN AI + S G+FELNVFKP+I L SLRLL D+ SF +C GI+ N+E+I LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD VVPEKMIGP Sbjct: 340 MGNDTAIGIAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNKEKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDQFVVPEKMIGP 461 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |