DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_SALTI (Fumarate hydratase class II OS=Salmonella typhi GN=fumC PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34 Identity = 71/121 (58.68%), Postives = 93/121 (76.86%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNV++PM+ L ++RLL D ASF ++C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK +A+ LG L+ EFD V PE M+G Sbjct: 341 MGNDVAINMGGASGNFELNVYRPMVIHNFLQTVRLLADGMASFNQHCASGIEPNRERITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDAEFDAWVRPELMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_YERPE (Fumarate hydratase class II OS=Yersinia pestis GN=fumC PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.093e-34 Identity = 70/121 (57.85%), Postives = 90/121 (74.38%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VAI +GG++G+FELNVF+P++ L S+RLL D F ++C GI+ NR+RI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK AA+ LG L EFD V PE M+G Sbjct: 341 MGNDVAINIGGASGNFELNVFRPLVIHNFLQSVRLLADGMRGFNEHCALGIEPNRDRITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAAMALGYLTDAEFDEWVRPEDMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_MYXXD (Fumarate hydratase class II OS=Myxococcus xanthus (strain DK 1622) GN=fumC PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.093e-34 Identity = 71/121 (58.68%), Postives = 90/121 (74.38%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN VA+TVGG++G+F+LNVFKP+IA LL S RLL D SF +C GI+ NR RI + L SLMLVT+LNP IGYDNAA +AK AH++GTTLK+ A+ LG++ E+FD V PE M G Sbjct: 343 MGNDVAVTVGGASGNFQLNVFKPLIAHNLLQSCRLLADGMRSFRLHCAVGIEPNRPRIQENLERSLMLVTALNPHIGYDNAAKIAKTAHRDGTTLKETAVALGLVTPEQFDQWVRPEDMTG 463
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BRUSU (Fumarate hydratase class II OS=Brucella suis GN=fumC PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33 Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GN A+TV S GHFELNVFKP+IA +L S+RLL D SF +CV GI+ N RI +LL SLMLVT+L P IGYDNAA +AK AHK GTTL++ AL G+++ E++D LV E+MI P Sbjct: 342 GNQTAVTVAASQGHFELNVFKPVIAYNVLQSIRLLSDTMVSFADHCVEGIEPNTARIKELLERSLMLVTALAPAIGYDNAARIAKTAHKNGTTLREEALASGLVSEEDYDRLVRAERMIAP 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BRUME (Fumarate hydratase class II OS=Brucella melitensis GN=fumC PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33 Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GN A+TV S GHFELNVFKP+IA +L S+RLL D SF +CV GI+ N RI +LL SLMLVT+L P IGYDNAA +AK AHK GTTL++ AL G+++ E++D LV E+MI P Sbjct: 342 GNQTAVTVAASQGHFELNVFKPVIAYNVLQSIRLLSDTMVSFADHCVEGIEPNTARIKELLERSLMLVTALAPAIGYDNAARIAKTAHKNGTTLREEALASGLVSEEDYDRLVRAERMIAP 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RHIME (Fumarate hydratase class II OS=Rhizobium meliloti GN=fumC PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33 Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = -3 Query: 325 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 690 GNH A+T GS GHFELNV+ P++A L S++LL DA+ SF NCV GI+A + I L SLMLVT+L PKIGYDNAA +AK AHK GTTL++ A+ G + EEFD +V PE MIGP+ Sbjct: 342 GNHAALTFAGSQGHFELNVYNPLMAYNFLQSVQLLADAAISFTDNCVVGIEAREDNIKAALDRSLMLVTALAPKIGYDNAAKIAKTAHKNGTTLREEAVGGGYVTDEEFDAVVRPETMIGPA 463
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BORPE (Fumarate hydratase class II OS=Bordetella pertussis GN=fumC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN VAI VGG++G+FELNVFKP++ L S+RLL D SF+K+C GI+ NRERI++L+ SLMLVT+LNP IGYD AA +AKKAHKE +LK+AAL LG L +F VVP M Sbjct: 340 MGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDM 458
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BORPA (Fumarate hydratase class II OS=Bordetella parapertussis GN=fumC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN VAI VGG++G+FELNVFKP++ L S+RLL D SF+K+C GI+ NRERI++L+ SLMLVT+LNP IGYD AA +AKKAHKE +LK+AAL LG L +F VVP M Sbjct: 340 MGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDM 458
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BORBR (Fumarate hydratase class II OS=Bordetella bronchiseptica GN=fumC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN VAI VGG++G+FELNVFKP++ L S+RLL D SF+K+C GI+ NRERI++L+ SLMLVT+LNP IGYD AA +AKKAHKE +LK+AAL LG L +F VVP M Sbjct: 340 MGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDM 458
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_CHRVO (Fumarate hydratase class II OS=Chromobacterium violaceum GN=fumC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.720e-33 Identity = 68/120 (56.67%), Postives = 91/120 (75.83%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 +GN A+ +G ++G+FELNVFKP+IA L S RLL D S ++CV G++ANR RI++L+ SLMLVT+LNP IGYD AAA+AK AH+ GTTL++AAL LG L++E+FD V PE M+ Sbjct: 342 LGNDAALAIGAASGNFELNVFKPLIAHNFLQSARLLADGMDSLREHCVDGMEANRARIAELMARSLMLVTALNPHIGYDKAAAIAKHAHRHGTTLREAALALGHLSAEQFDAWVRPEDMV 461 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |