DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_COXBU (Fumarate hydratase class II OS=Coxiella burnetii GN=fumC PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.831e-32 Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 IGN IT+ GS G+FELNV+KP++A L+ S+ LL DA SF +C GI+ N+E+I+ L+ SLMLVT+LN IGYD A+ +AKKA+KEGTTLK+AAL+LG L + EFD V P+KM+ Sbjct: 338 IGNDTTITIAGSQGNFELNVYKPVMAYNLIQSIYLLSDACRSFNDHCAVGIKPNQEKINDYLNNSLMLVTALNQIIGYDKASEIAKKAYKEGTTLKEAALQLGYLTASEFDKAVDPKKMV 457
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BACCR (Fumarate hydratase class II OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=fumC PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32 Identity = 69/124 (55.65%), Postives = 88/124 (70.97%), Query Frame = -3 Query: 322 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 693 +GN I S G+FELNVFKP+IA L S LL DA SF NC GI+A+ E I++ ++ SLMLVT+LNP IGY+NAA +AK AHKEG TLK+AAL+ G+L E+FD +V P+KMI P + Sbjct: 339 MGNDATIGFAASQGNFELNVFKPVIAYNFLQSAHLLADAIVSFNDNCAVGIEADEEVINENVNRSLMLVTALNPHIGYENAAKIAKHAHKEGLTLKEAALQSGLLTEEQFDEIVDPKKMIAPKE 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_AGRT5 (Fumarate hydratase class II OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fumC PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GN+ A++ GS GHFELNV+ PM+A L S++LLGDA+ SF NCV GI+A + I K + SLMLVT+LN K+GYD A +AK AHK GTTL++ A+ G L +EEFD V PE MIGP Sbjct: 342 GNNAALSFAGSQGHFELNVYNPMMAYNFLQSVQLLGDAAVSFTDNCVVGIEAREDNIRKGVENSLMLVTALNGKLGYDICAKIAKTAHKNGTTLREEAVGGGYLTNEEFDQYVRPENMIGP 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_PASMU (Fumarate hydratase class II OS=Pasteurella multocida GN=fumC PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.115e-31 Identity = 65/121 (53.72%), Postives = 88/121 (72.73%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN I+ G+ GHF+LNVFKP++A+ L S +LL DA SF+++C GI+ N RI K L +SLMLVT+LN IGY+NAA +AK AHK GTTLK+ A+ LG++ +E+FD V PE M+G Sbjct: 341 LGNDTTISFAGTQGHFQLNVFKPVMAANFLQSAQLLADACVSFDEHCAVGIEPNFPRIKKQLDDSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQFDEWVRPEDMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BACAN (Fumarate hydratase class II OS=Bacillus anthracis GN=fumC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.483e-31 Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = -3 Query: 322 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 693 +GN I S G+FELNVFKP+IA L S LL DA SF NC GI+A+ E I + ++ SLMLVT+LNP IGY+NAA +AK AHKEG TLK+AAL+ G+L E+F+ +V P+KMI P + Sbjct: 339 MGNDATIGFAASQGNFELNVFKPVIAYNFLQSAHLLADAIVSFNDNCAVGIEADEEIIKENVNRSLMLVTALNPHIGYENAAKIAKHAHKEGLTLKEAALQSGLLTEEQFNEIVDPKKMIAPKE 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_WIGBR (Fumarate hydratase class II OS=Wigglesworthia glossinidia brevipalpis GN=fumC PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.236e-31 Identity = 69/121 (57.02%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 IGN AI +GG +G+F+LNVF+PMI L S+R+L D SF K CV GI+ N +RI K L ESLMLVTSL P IGYD +A +AK AH E TLK+A LKL ++ +FD LV PE MIG Sbjct: 341 IGNDSAIGIGGLSGNFQLNVFRPMIIYNFLQSVRILSDGIKSFNKKCVIGIKPNIKRIKKFLKESLMLVTSLTPHIGYDKSAKIAKLAHNENITLKEACLKLNYISESQFDILVRPENMIG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_THEEB (Fumarate hydratase class II OS=Thermosynechococcus elongatus (strain BP-1) GN=fumC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31 Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN A+ + GS G+FELNV+KP+I +L S+ LL DA+ SF +C+ G++ NR++I + SLMLVT+LNP IGYD AAAVAKKA+ EG TLK+AA++LG L +EEFD V E M+G Sbjct: 342 MGNDAAVGIAGSQGNFELNVYKPLIIYNVLQSIALLSDAAQSFTDHCLVGVEPNRQQIQAYVERSLMLVTALNPHIGYDKAAAVAKKAYSEGKTLKEAAVELGYLTAEEFDRWVRLELMLG 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_RHILO (Fumarate hydratase class II OS=Rhizobium loti GN=fumC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GN+ A+T GS GHFELNV+ P++A L S++LL DAS SF NCV GI+A + I L SLMLVT+L P IGYDNAA +AK AHK GTTL++ AL G+++ ++D LV PE M P Sbjct: 344 GNNAALTFAGSQGHFELNVYNPLMAYNFLQSVQLLSDASVSFTDNCVVGIEAREDNIKAALDRSLMLVTALAPTIGYDNAAKIAKTAHKNGTTLREEALATGLVSEVDYDRLVRPEDMTHP 464
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_HAEDU (Fumarate hydratase class II OS=Haemophilus ducreyi GN=fumC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31 Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 +GN I+ GS GHF+LNVFKP++A+ L S +LL D SF+++C GI+ N RI + L SLMLVT+LN IGY+NAA +AK AHK GTTLK+ A+ LG++ +E+FD V P+ M+G Sbjct: 341 LGNDTTISFAGSQGHFQLNVFKPVMAANFLQSAQLLADVCISFDEHCASGIEPNYPRIQQQLENSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQFDQWVRPQNMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_CAMJE (Fumarate hydratase class II OS=Campylobacter jejuni GN=fumC PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31 Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN VAI S G+FELNVFKP+I L SL LL D+ SF +C GI+ NR +I LH SLMLVT+LNP IGY+NAA VAK AHK+G +LK++ ++LG+++ E+F+ V P KMIGP Sbjct: 340 MGNDVAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEPNRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESTMELGLVSEEDFNKFVDPTKMIGP 461 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |