DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_NEIMA (Fumarate hydratase class II OS=Neisseria meningitidis serogroup A GN=fumC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.437e-31 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GN V I + G++G+FELNV+ P+IA LL S+RLLGDA SF ++C GI+ E+I LH SLMLVT+LN KIGY+NAA VAK A+K +L++ A++LG+L EEFD LVVP M+ P Sbjct: 341 GNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEPVPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFDELVVPADMVHP 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_CAUCR (Fumarate hydratase class II OS=Caulobacter crescentus GN=fumC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30 Identity = 66/121 (54.55%), Postives = 83/121 (68.60%), Query Frame = -3 Query: 328 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 690 GNH +T GS GHFELNVF P++A L S+RL+ DA+ SF NCV GI+ + I K + SLMLVT+LN K+GYD A +AK AHK GTTL++ A+ G L +EEF+ V PEKMI P Sbjct: 342 GNHSTLTFAGSQGHFELNVFNPVMAYNFLQSVRLVADAAISFTDNCVVGIEPRVDNIKKGVENSLMLVTALNGKLGYDACAKIAKTAHKNGTTLREEAVGGGYLTNEEFEQYVRPEKMISP 462
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_NITEU (Fumarate hydratase class II OS=Nitrosomonas europaea GN=fumC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN VAI +GG+ G+FELN KP+I L S RLL D + SF +C GI AN RI + L ESLMLVT+LNP IGYD AA +AKKAH E TLK+AA++LG + +E+FD V P+KM Sbjct: 341 MGNDVAINLGGAMGNFELNTMKPLIIHNFLQSTRLLADGAESFNTHCAAGITANTVRIKQHLQESLMLVTALNPHIGYDKAAEIAKKAHHEMLTLKEAAIRLGYVTAEQFDVWVDPQKM 459
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_SYNY3 (Fumarate hydratase class II OS=Synechocystis sp. (strain PCC 6803) GN=fumC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30 Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN I S G+FELNVFKP+I LHSL LL DA ASF ++ V G+Q N ++ L SLMLVT+LNP IGYDNAA VAK A +G TLK AA+ LG+L +FD VVPE+MI P Sbjct: 342 MGNDATIGFAASQGNFELNVFKPVIIHNFLHSLHLLSDACASFRQHLVVGLQVNESKVKDFLDTSLMLVTALNPHIGYDNAALVAKTAFAQGITLKQAAVDLGLLTPAQFDAWVVPEQMIAP 463
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_HAEIN (Fumarate hydratase class II OS=Haemophilus influenzae GN=fumC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30 Identity = 63/120 (52.50%), Postives = 85/120 (70.83%), Query Frame = -3 Query: 331 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 690 GN I GS GHF+LNVF P++ + L S +LLGDA SF+++C GI+ N RI + L SLMLVT+LN IGY+NAA +AK AHK GTTL++ A+ LG++++E+FD V PE M+G Sbjct: 342 GNDTTIAFVGSQGHFQLNVFNPVMIANFLQSAQLLGDACVSFDEHCAVGIEPNYPRIKQQLENSLMLVTALNTHIGYENAAKIAKTAHKNGTTLREEAINLGLVSAEDFDKWVRPEDMVG 461
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BACHD (Fumarate hydratase class II OS=Bacillus halodurans GN=fumC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30 Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IGN I S G+FELNVFKP+I L S LL D +F C+ G++AN I K L+ESLMLVT+LNP IGY+NAA +AKKAH EG TLK+AA++ G+L EEF+ +V P KM+ P Sbjct: 339 IGNDATIAFAASQGNFELNVFKPVIIYNFLQSTTLLTDGLRTFHDKCLIGLEANETIIKKHLNESLMLVTALNPHIGYENAAKIAKKAHAEGLTLKEAAMQSGLLTEEEFEKMVDPAKMVHP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_BACSU (Fumarate hydratase class II OS=Bacillus subtilis GN=fumC PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN I S G+FELNVFKP+I L S++LL D SF C GI+ N+E I + L SLMLVT+LNP IGY+NAA +AK AHKEG TLK+AALKL +L E+F+ +V PE M+ P Sbjct: 339 MGNDATIGFAASQGNFELNVFKPVIIYNFLQSVQLLSDGMNSFHDKCAVGIEPNKETIQENLSNSLMLVTALNPHIGYENAAKIAKLAHKEGLTLKEAALKLELLTEEQFNEMVKPEDMVKP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMH_SCHPO (Fumarate hydratase, mitochondrial OS=Schizosaccharomyces pombe GN=fum1 PE=2 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 1.043e-29 Identity = 67/120 (55.83%), Postives = 84/120 (70.00%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 +GNH ITV G++GH ELNVFKP++A +L S+RLLGDA SF +CV GI+ N E I++ L +SLMLVT+LNP IGYDN A +AK A K +TLK + LG E+FD V PE MI Sbjct: 396 MGNHATITVAGASGHCELNVFKPLLAKNILSSIRLLGDACESFTDHCVVGIEPNYEGIARHLRDSLMLVTALNPHIGYDNCAKIAKTALKNKSTLKHEFVTLGFGTPEQFDEWVRPELMI 515
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_OCEIH (Fumarate hydratase class II OS=Oceanobacillus iheyensis GN=fumC PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.043e-29 Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN AI S G+FELNVFKP+IA L S +LL D+ SF++ C GI+ N E+I K L++SLMLVT+LNP IGY+NAA +AKKA + +TLK+ A++LG+L E+FD V PE+M P Sbjct: 339 MGNDAAIGFAASQGNFELNVFKPVIAYNFLQSSQLLADSIISFDERCAVGIEPNHEQIEKNLNDSLMLVTALNPHIGYENAAKIAKKAFADNSTLKETAVELGLLTEEQFDEYVNPEEMTYP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC2_PSEAE (Fumarate hydratase class II 2 OS=Pseudomonas aeruginosa GN=fumC2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 63/120 (52.50%), Postives = 85/120 (70.83%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 +GN I+ S GH +LNVFKP+I LL S+RLL D +F K+CV G++ + +R++ LL LMLVT+LNP IGYD AA +AKKA+ EGTTL+ AAL+LG L+ +FD V PE+M+ Sbjct: 339 MGNDSTISFAASQGHLQLNVFKPVIVYNLLESIRLLADGCRNFNKHCVAGLEPDAQRMADLLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLRAAALQLGYLDEAQFDEWVRPEQML 458 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |