DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_PSEPK (Fumarate hydratase class II OS=Pseudomonas putida (strain KT2440) GN=fumC-2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29 Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN AI S GH +LNVFKP+I LL S+ LL D +F+++CV GI+ + E+++ L LMLVT+LNP IGYD AA +AKKA+ EGTTL++AAL L L +E+FD V PE M+ P Sbjct: 339 LGNDAAIGFAASQGHLQLNVFKPVIIHNLLQSIELLADGCRNFQQHCVAGIEPDAEQMAAHLERGLMLVTALNPHIGYDKAAEIAKKAYSEGTTLREAALALKYLTNEQFDQWVRPENMLAP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAES (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fumC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28 Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + + S G+FELNVFKP+I L S+ LL D +F KNC GIQ E I+ L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + +F+ + PE M+ P Sbjct: 339 MGNDTTVGIASSQGNFELNVFKPVIMHNTLQSIYLLADGMNTFNKNCAIGIQPIEENINNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIESGYVTESQFEEWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAEQ (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fumC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28 Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + + S G+FELNVFKP+I L S+ LL D +F KNC GIQ E I+ L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + +F+ + PE M+ P Sbjct: 339 MGNDTTVGIASSQGNFELNVFKPVIMHNTLQSIYLLADGMNTFNKNCAIGIQPIEENINNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIESGYVTESQFEEWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_PSESM (Fumarate hydratase class II OS=Pseudomonas syringae pv. tomato GN=fumC-1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = -3 Query: 334 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 693 +GN V I S GH +LNV+KP+I +L S+RLL D ++F ++CV G++ + E++++ L LMLVT+LNP IGYD +A +AKKA+ EG TL++AAL LG L EEFD V P+KM+ Sbjct: 339 MGNDVTIGFAASQGHLQLNVYKPVIIHNVLQSIRLLADGCSNFNEHCVAGMEPDAEKMAEHLERGLMLVTALNPHIGYDKSAHIAKKAYTEGLTLREAALALGYLTDEEFDAWVRPDKML 458
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAHJ (Fumarate hydratase class II OS=Staphylococcus haemolyticus (strain JCSC1435) GN=fumC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28 Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + + S G+FELNVFKP+I L S+ LL D +F NC GI+ E I+ L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTTVGIASSQGNFELNVFKPVILHNTLQSIYLLADGMQTFNDNCAVGIEPIEENINNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQSGHVTEEQFEEWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_DEIRA (Fumarate hydratase class II OS=Deinococcus radiodurans GN=fumC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = -3 Query: 346 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVP 690 GN + GS G+F+LNVFKP++ +L S+RL+ DA +F +C GIQ N +I + L ++LM VT+LN IGYD AAA+AKKAHKEGT+LKDAAL LG + +EF VVP Sbjct: 344 GNDATVAFAGSQGNFQLNVFKPVMVHAVLESIRLISDACLAFNDHCAVGIQPNEAKIKENLDKNLMQVTALNRHIGYDKAAAIAKKAHKEGTSLKDAALALGYVTEDEFAQWVVP 458
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_THEAQ (Fumarate hydratase class II OS=Thermus aquaticus GN=fumC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 61/123 (49.59%), Postives = 86/123 (69.92%), Query Frame = -3 Query: 322 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 690 GN A+ GS G+F+LNV+KP++ L S++LLGDA ASF+++ +GI+ N ERI + L+++ ML T+LN IGYD AA + KKA KE +LK AAL+LG L EEFD +VVP ++ P + Sbjct: 342 GNDQAVAFAGSQGNFQLNVYKPVMVDAALESIKLLGDAVASFDQHLAQGIEPNLERIEEHLNKNPMLATALNKAIGYDKAAEIVKKAIKEKKSLKQAALELGYLTEEEFDRIVVPMRLAKPHE 464
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAS1 (Fumarate hydratase class II OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=fumC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.666e-27 Identity = 58/122 (47.54%), Postives = 82/122 (67.21%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN A+ + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA++AKKAH+EG TLK++A+ G + E+F+ + PE M+ P Sbjct: 339 MGNDTAVGIASSQGNFELNVYKPVILLNTLQSIYLLADGMDTFNNNCAVGIEPIPENIDNYLNQSLMLVTALNPHIGYEKAASIAKKAHREGLTLKESAIDSGYVTEEQFEQWIKPEDMVEP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAAW (Fumarate hydratase class II OS=Staphylococcus aureus (strain MW2) GN=fumC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAAS (Fumarate hydratase class II OS=Staphylococcus aureus (strain MSSA476) GN=fumC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |