DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAAR (Fumarate hydratase class II OS=Staphylococcus aureus (strain MRSA252) GN=fumC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAAN (Fumarate hydratase class II OS=Staphylococcus aureus (strain N315) GN=fumC PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAAM (Fumarate hydratase class II OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fumC PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_STAAC (Fumarate hydratase class II OS=Staphylococcus aureus (strain COL) GN=fumC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 +GN + S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 339 MGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_THET2 (Fumarate hydratase class II OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=fumC PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = -3 Query: 322 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPSD 690 GN + GS G+F+LNV+KP++A L S+ LL DA ASF+ + +GI+ N ERI + L ++ ML T+LN IGYD AA + KKA KE TLK AAL+LG L EEFD +VVP ++ P + Sbjct: 342 GNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEHLQKNPMLATALNKAIGYDKAAEIVKKALKEKKTLKQAALELGYLTEEEFDRIVVPMRLAKPHE 464
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_METAC (Fumarate hydratase class II OS=Methanosarcina acetivorans GN=fumC PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = -3 Query: 331 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 693 IG A+ GS G+FELN P+I + +LHS R LGDA F + + GI +R RI K + SLMLVT+L+P IGYD A+A+ ++A E TTL++AA+K G +++E+FD +V P+KM+G Sbjct: 353 IGEDNAVAFAGSQGNFELNAMCPIIINNVLHSARTLGDACVKFREYGINGIMLDRSRIDKFVGTSLMLVTALSPVIGYDKASAIVQRALDENTTLREAAVKGGFISAEDFDRIVDPKKMVG 473
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_LISMO (Fumarate hydratase class II OS=Listeria monocytogenes GN=fumC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 59/119 (49.58%), Postives = 81/119 (68.07%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN V I V S G+FELNV+KP+I L S++LL D+ SF +C+ G+ AN + I +++SLMLVT+LNP IGY+ AA +AK A E TTLK+AA+K G + +EFD + P KM Sbjct: 334 MGNDVTINVAASQGNFELNVYKPVIIFNFLESIKLLADSMRSFRVHCLEGLTANEKVIETKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWINPLKM 452
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_SYNPX (Fumarate hydratase class II OS=Synechococcus sp. (strain WH8102) GN=fumC PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26 Identity = 53/122 (43.44%), Postives = 81/122 (66.39%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IG A+ G+ GH ++NV+KP+I L+ +RLL DA F N + G++A+R+RI+ + SLMLVT+L P+IGY+ A A+A+ AH++G TL++AA++ G + E FD L+ P M P Sbjct: 342 IGMDAAVAAAGAGGHLQMNVYKPLIGYNLIEGIRLLQDACRCFRLNLLTGMEADRDRIAFYVERSLMLVTALTPEIGYEKACAIAQHAHRDGLTLREAAMQSGAITDERFDQLIDPAAMASP 463
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_LISMF (Fumarate hydratase class II OS=Listeria monocytogenes serotype 4b (strain F2365) GN=fumC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN V I V S G+FELNV+KP+I L S++LL D+ SF +C+ G+ AN + I +++SLMLVT+LNP IGY+ AA +AK A E TTLK+AA+K G + ++FD + P KM Sbjct: 334 MGNDVTINVAASQGNFELNVYKPVIIFNFLESVKLLSDSMRSFRLHCLEGLTANEKVIETKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKQFDLWIDPLKM 452
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_PROMM (Fumarate hydratase class II OS=Prochlorococcus marinus (strain MIT 9313) GN=fumC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25 Identity = 57/119 (47.90%), Postives = 83/119 (69.75%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 IG A+T+ G +GH ++NV+KP+I LLHS+ LL DA + V+GI+ NR +I L +SLMLVT+L P+IGYD A+ +A AH++G +L++AALKLG ++ E+FD +V P M Sbjct: 343 IGLDSAVTMAGGSGHLQMNVYKPLIGFNLLHSIELLHDACRKYRLAMVQGIEPNRIKIQHDLEQSLMLVTALAPEIGYDKASEIAHLAHEKGFSLREAALKLGYVSKEDFDRIVNPALM 461 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |