DC887526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: ASPA_HELPY (Aspartate ammonia-lyase OS=Helicobacter pylori GN=aspA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IGN +++ + G +LNVF+P+IA L HS +LG A + CV GI AN + + S+ +VT+LNP IGY+ +A +AK+A K ++ D AL+ +L E+ D++ PE M+ P Sbjct: 339 IGNDLSVALAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEKICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: ASPA_HELPJ (Aspartate ammonia-lyase OS=Helicobacter pylori J99 GN=aspA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IGN +++ + G +LNVF+P+IA L HS +LG A + CV GI AN + + S+ +VT+LNP IGY+ +A +AK+A K ++ D AL+ +L E+ D++ PE M+ P Sbjct: 339 IGNDLSVALAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEKICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_MYCTU (Fumarate hydratase class II OS=Mycobacterium tuberculosis GN=fumC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = -3 Query: 379 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVL 693 IGN AI GG+NG FELNV+ PM+A +L S +LL + S F + C+ G+ AN E + +L S +VT LN IGY+ AAAVAK+A KE T++ + G++ Sbjct: 341 IGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLI 445
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_MYCBO (Fumarate hydratase class II OS=Mycobacterium bovis GN=fumC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = -3 Query: 379 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVL 693 IGN AI GG+NG FELNV+ PM+A +L S +LL + S F + C+ G+ AN E + +L S +VT LN IGY+ AAAVAK+A KE T++ + G++ Sbjct: 341 IGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLI 445
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: ASPA_PSEFL (Aspartate ammonia-lyase OS=Pseudomonas fluorescens GN=aspA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IGN +A+T+ G +LNV +P+IA + S+RLL A ++C+ GI AN R +L+ S+ LVT+LNP IGY+NA +A+ A + G + + + G+L+ D+++ PE MI P Sbjct: 350 IGNDLALTMAAEGGQLQLNVMEPLIAFKIFDSIRLLQRAMDMLREHCIVGITANEARCRELVEHSIGLVTALNPYIGYENATRIARIALESGRGVLELVREEGLLDDAMLDDILRPENMIAP 471
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_HALSA (Fumarate hydratase class II OS=Halobacterium salinarium GN=fumC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = -3 Query: 337 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 693 +GN AI G + G +LN++KP++A L S +L +ASA+F + V ++AN + S+ L T+LNP IGYD A+ VAK A KEG T+ + ++ G L+ E +++ PE M Sbjct: 341 VGNDAAIAAGAAEGQIDLNLYKPVLAHNFLQSADMLANASAAFGEKFVAKLEANEAACEAQVERSMALATALNPTIGYDKASEVAKAALKEGKTVTEVVVEKGYLSEAEAADVLDPEGM 459
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: ASPA_PSEAE (Aspartate ammonia-lyase OS=Pseudomonas aeruginosa GN=aspA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 46/122 (37.70%), Postives = 74/122 (60.66%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IGN +A+T+ G +LNV +P+IA + S+RLL A ++C+ GI AN ER +L+ S+ LVT+LNP IGY+N+ +AK A + G + + + +L+ ++++PE MI P Sbjct: 346 IGNDLALTLAAEGGQLQLNVMEPLIAYKIFDSIRLLQRAMDMLREHCITGITANVERCHELVEHSIGLVTALNPYIGYENSTRIAKTALESGRGVLELVREEKLLDEATLADILLPENMIAP 467
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: ASPA_BACSU (Aspartate ammonia-lyase OS=Bacillus subtilis GN=ansB PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 43/122 (35.25%), Postives = 75/122 (61.48%), Query Frame = -3 Query: 328 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 693 IGN I + G ELNV +P++ LL S+ ++ + SF NC++GI+AN +R+ + + +S ++T++NP +GY+ AA +A++A G +++D L+ VL EE D ++ P +M P Sbjct: 344 IGNDNTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGFRSFTDNCLKGIEANEKRMKQYVEKSAGVITAVNPHLGYEAAARIAREAIMTGQSVRDLCLQHDVLTEEELDIILNPYEMTKP 465
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFT (Fumarate hydratase class II OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fumC PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = -3 Query: 346 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVP 693 IG+H A+TV G +G+F+LNV P+IA LL S LLG+ + G++ ++R+ ++L + +LVT+LNP IGY+ AA +AK+A+KE + + A + LN E L+ P Sbjct: 342 IGHHTAVTVAGQSGNFQLNVTLPLIAYNLLESATLLGNVVMLLADKVIVGLKVRQDRVQEVLERNPILVTALNPIIGYEKAAVIAKRAYKEHRPVLEVACEESNLNPVELARLLDP 457
BLAST of DC887526 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFA (Fumarate hydratase class II OS=Xylella fastidiosa GN=fumC PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = -3 Query: 346 IGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVP 693 IG+H A+TV G +G+F+LNV P+IA LL S LLG+ + G++ ++R+ ++L + +LVT+LNP IGY+ AA +AK+A+KE + + A + LN E L+ P Sbjct: 342 IGHHTAVTVAGQSGNFQLNVTLPLIAYNLLESATLLGNVVMLLADKVIVGLKVRQDRVQEVLERNPILVTALNPIIGYEKAAVIAKRAYKEHRPVLEVACEESNLNPVELARLLDP 457 The following BLAST results are available for this feature:
BLAST of DC887526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887526 ID=DC887526; Name=DC887526; organism=Citrus sinensis; type=EST; length=695bpback to top |