CN184829

Overview
NameCN184829
Unique NameCN184829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:2095..2782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = -3
Query:  342 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 668
            ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP++ E  A+ L+    K  A+   W K    GLK I   ++W  + +  L+
Sbjct:  558 DIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALL----KLVAEKHLWAKCRANGLKNI-HLFSWPEHCKSYLS 661          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = -3
Query:  342 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 668
            E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  ++ + W++    GLK I   ++W  + +  LT
Sbjct:  580 EIYRLASKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALL----KLVSEKNLWNECRKNGLKNI-HLFSWPEHCRTYLT 683          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = -3
Query:  315 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRLLTLTGVYGFWK 668
            ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  IDP+  +  A+ L+    K  ++   W K    GLK I   ++W    K Y  ++ T    +  W+
Sbjct:  560 DIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADALL----KLVSNKQLWAKCRQNGLKNI-HLFSWPEHCKTYLSKIATCKPRHPQWQ 676          
The following BLAST results are available for this feature:
BLAST of CN184829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SPS1_CRAPL1.249e-1136.70Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
SPS2_CRAPL2.782e-1135.78Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS_VICFA4.745e-1134.43Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184829 ID=CN184829; Name=CN184829; organism=Citrus sinensis; type=EST; length=688bp
GAGGATGGAATTGATGAGGGTGGAACACCCAAAAGTACAAACAATGCTGA
GAAATGCAAAAAGGCAAAAAAAAATTGGAAAAAAGAAAATTTAACGGGGG
GAAAAAAGTCTTTGTCCAATCGCAATCCCGGAAGCGACATTATTCTCCAC
AACTCAAGAAACCTCCACTCGGACCAACCACCCTGAGAGCTTCCCTCAAT
GTCCATTTACTCCTCCACAGCCAGAGGAACAGATTCAGCCAGCTTACGGT
ACTTGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGACGATCA
AGGTTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGTCAGAAG
CCTCTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCTTCAGGC
CACCCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCACTTCTCA
AAGAAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGGATCAAT
GTGGTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCACCCTTGC
AAGTTGCAAATGTTGGCAATCCACAGGTCATGGCCTCAACAACAGTCAAG
CCAAAGGCCTCATACAGTGCAGGTTGCACAAAAGCTCCCTTTGTATCACA
AATGTACCGGTACAATTCACCGTTCCTGACCCGATTCA
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