CN184828

Overview
NameCN184828
Unique NameCN184828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length338
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.606e-13
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1 
Query:   34 SLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            SLR+R + T S+HR EI   LSRI+  G GIL+ HQL +EF++IS+ +R  L + A  ++L + QEAIV  PW
Sbjct:    7 SLRQRFESTFSSHRQEIFMFLSRIQSLGNGILKPHQLFSEFQAISKIDRLKLEDSALVQLLNSAQEAIVCSPW 79
The following BLAST results are available for this feature:
BLAST of CN184828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SUS2_DAUCA1.606e-1349.32Sucrose synthase isoform 2 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D02_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184828 ID=CN184828; Name=CN184828; organism=Citrus sinensis; type=EST; length=338bp
TCAATGGCCGAACGTGCTTTGACCCGCGTTCACAGTCTCCGCGAGCGTTT
GGATGAGACTCTCTCTGCCCACAGGAATGAAATCTTGGCCCTTTTGTCAA
GGATTGAGGGCAAGGGCAAGGGAATCTTGCAAAACCATCAACTTATTGCT
GAGTTTGAATCAATTTCTGAGGAAAACAGAAAGCATCTAACTGAGGGGGC
ATTTGGTGAAGTTCTAAGAGCCACCCAGGAAGCAATTGTTTTGCCTCCGT
GGGGTAGCGCTTGCCGTGCGTCCAAGGCCCGGTGTGTGGGAGTACATCCG
AGTGAATGTCCATGCCCTTGTCCGTTGAAGGAGCTGCT
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