CN184827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB1_ANASP (Tryptophan synthase beta chain 1 OS=Anabaena sp. (strain PCC 7120) GN=trpB1 PE=3 SV=1) HSP 1 Score: 362.844 bits (930), Expect = 1.310e-99 Identity = 172/224 (76.79%), Postives = 198/224 (88.39%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA+IGKETR Q EKWGG PD+L+ACVGGGSNA+GLFHEF+++ +RLIGVEAAG G+D+ KHAATL+ G VGVLHGA+SYLLQ+EDGQ+IE HSISAGLDYPGVGPEHS+LKD RAEYY+VTD +AL+ F++ SRLEGIIPALET+HA+AYLE LCP L ++V+N SGRGDKDVQT K L Sbjct: 184 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMIVRDFHAIIGKETRVQCQEKWGGLPDILLACVGGGSNAIGLFHEFIDEPSIRLIGVEAAGEGVDTDKHAATLTLGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDIRRAEYYSVTDKQALDGFQQLSRLEGIIPALETSHAIAYLETLCPQLNGSPRIVINCSGRGDKDVQTVAKVL 407
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PROM1 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpB PE=3 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 1.269e-94 Identity = 166/224 (74.11%), Postives = 195/224 (87.05%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHAVIG+ET++Q + +G PDVL+ACVGGGSNAMGLFH FV DK VR+IGVEAAG G+++G+HAAT+++G VGVLHGA+S LLQ++DGQ+ E HSISAGLDYPGVGPEHS+LK+ GRAEY VTD EA+EA + S+LEGIIPALETAHA AYLEKLCPTL +++V+N SGRGDKDV T + L Sbjct: 190 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGEETKQQCKQAFGRSPDVLLACVGGGSNAMGLFHSFVEDKSVRMIGVEAAGDGVETGRHAATITEGRVGVLHGAMSLLLQDKDGQVEEAHSISAGLDYPGVGPEHSYLKEIGRAEYAAVTDTEAIEALQLVSKLEGIIPALETAHAFAYLEKLCPTLNHNSEIVINCSGRGDKDVNTVAEKL 413
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PROMT (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL2A) GN=trpB PE=3 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.657e-94 Identity = 165/224 (73.66%), Postives = 195/224 (87.05%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHAVIG+ET++Q + +G PDVL+ACVGGGSNAMGLFH FV DK VR+IGVEAAG G+++G+HAAT+++G +GVLHGA+S LLQ++DGQ+ E HSISAGLDYPGVGPEHS+LK+ GRAEY VTD EA+EA + S+LEGIIPALETAHA AYLEKLCPTL +++V+N SGRGDKDV T + L Sbjct: 190 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGEETKQQCKQAFGRSPDVLLACVGGGSNAMGLFHSFVEDKSVRMIGVEAAGDGVETGRHAATITEGRIGVLHGAMSLLLQDKDGQVEEAHSISAGLDYPGVGPEHSYLKEIGRAEYAAVTDTEAIEALQLVSKLEGIIPALETAHAFAYLEKLCPTLNHNSEIVINCSGRGDKDVNTVAEKL 413
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_SYNSC (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9605) GN=trpB PE=3 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 4.822e-94 Identity = 167/224 (74.55%), Postives = 194/224 (86.61%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHAVIG+E+++Q E +G PDVL+ACVGGGSNAMGLFH FV D VRLIGVEAAG G+ SG+HAAT+++G GVLHGA+S LLQ+ DGQ++E HSISAGLDYPGVGPEHS+L++ GRAEY VTD +AL+A + S LEGIIPALETAHA A+LE+LCPTLADGT+VV+N SGRGDKDV T + L Sbjct: 191 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGEESKQQCQEAFGRLPDVLMACVGGGSNAMGLFHPFVQDMSVRLIGVEAAGDGVASGRHAATITEGRAGVLHGAMSLLLQDGDGQVMEAHSISAGLDYPGVGPEHSYLREIGRAEYAAVTDQQALDALRLVSELEGIIPALETAHAFAWLEQLCPTLADGTEVVINCSGRGDKDVNTVAEKL 414
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PROMP (Tryptophan synthase beta chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpB PE=3 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 6.298e-94 Identity = 165/226 (73.01%), Postives = 194/226 (85.84%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWV+NVETTHYILGSVAGPHP+PM+VRDFHAVIG+E ++Q LE +G PD+L+ACVGGGSNAMGLFH FV +K VRLIGVEAAG G+++ KHAAT++KG VG+LHG++S LLQ++DGQ+ E HSISAGLDYPGVGPEHS+LKD GRAEY +VTD EAL+A K S LEGIIPALETAHA A+LEKLCPTL T++V+N SGRGDKDV T L + Sbjct: 188 KDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAVIGEEAKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKEKSVRLIGVEAAGSGVNTEKHAATITKGSVGILHGSMSLLLQDKDGQVQEAHSISAGLDYPGVGPEHSYLKDIGRAEYGSVTDAEALDALKLVSELEGIIPALETAHAFAWLEKLCPTLDKDTEIVINCSGRGDKDVNTVASSLNI 413
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_SYNPW (Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH7803) GN=trpB PE=3 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.074e-93 Identity = 170/224 (75.89%), Postives = 194/224 (86.61%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHAVIG+ETR+Q E +G PDVL+ACVGGGSNAMGLFH FV DVRLIGVEAAG G+ +G+HAAT+++G VGVLHGA+S LLQ++DGQ+ E HSISAGLDYPGVGPEHS+L++ GRAEY VTD EALEA + SRLEGIIPALETAHA A+LE LCPTL+ GT+VV+N SGRGDKDV T + L Sbjct: 189 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGQETRQQCREAFGRLPDVLMACVGGGSNAMGLFHPFVECTDVRLIGVEAAGDGVATGRHAATITEGRVGVLHGAMSLLLQDQDGQVQEAHSISAGLDYPGVGPEHSYLREIGRAEYGAVTDAEALEALQLVSRLEGIIPALETAHAFAWLETLCPTLSAGTEVVLNCSGRGDKDVNTVAERL 412
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PROMA (Tryptophan synthase beta chain OS=Prochlorococcus marinus GN=trpB PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 2.393e-93 Identity = 163/225 (72.44%), Postives = 193/225 (85.78%), Query Frame = -1 Query: 162 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHAVIG+E ++Q LE +G PDVL+ACVGGGSNAMGLFH F+ D+ VR+IGVEAAG G+ +G+HAAT+++G +GVLHGA+S LLQ+ +GQ+ E HSISAGLDYPGVGPEHS+LK+ GRAEY VTD EAL A + S EGIIPALETAHALA+LEKLCPTL+ G ++V+N SGRGDKDV T + L+ Sbjct: 189 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGEEAKKQCLEAFGRSPDVLLACVGGGSNAMGLFHPFIEDRSVRMIGVEAAGDGVHTGRHAATITEGRIGVLHGAMSLLLQDSNGQVQEAHSISAGLDYPGVGPEHSYLKEIGRAEYAAVTDQEALSALQLLSEKEGIIPALETAHALAFLEKLCPTLSSGKEIVINCSGRGDKDVNTVAEKLK 413
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS3 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9311) GN=trpB PE=3 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.125e-93 Identity = 166/224 (74.11%), Postives = 190/224 (84.82%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHAVIG E R Q E +G PDVL+ACVGGGSNAMGLFH FV D VRLIGVEAAG G+ +G+HAAT+++G VGVLHGA+S LLQ++DGQ+ E HSISAGLDYPGVGPEHS+L+D GRAEY VTDDEA+ A + S LEGIIPALETAHA A+LE LCPTL +G+++V+N SGRGDKDV T + L Sbjct: 191 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGNEAREQCKESFGRLPDVLLACVGGGSNAMGLFHPFVQDTSVRLIGVEAAGDGVATGRHAATITEGRVGVLHGAMSLLLQDQDGQVQEAHSISAGLDYPGVGPEHSYLRDIGRAEYGAVTDDEAITALRLVSELEGIIPALETAHAFAWLEMLCPTLPNGSEIVINCSGRGDKDVNTVAEKL 414
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PROM5 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9515) GN=trpB PE=3 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.125e-93 Identity = 163/226 (72.12%), Postives = 193/226 (85.40%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWV+NVETTHYILGSVAGPHP+PM+VRDFHAVIG+E ++Q +E +G PD+L+ACVGGGSNAMGLFH FV +K VRLIGVEAAG G+++ KHAAT++KG VG+LHG++S LLQ+++GQ+ E HSISAGLDYPGVGPEHS+LKD GRAEY +VTD EAL A K S LEGIIPALETAHA A+LEKLCPTL T++V+N SGRGDKDV T L + Sbjct: 189 KDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAVIGEEAKKQCVESFGSLPDILLACVGGGSNAMGLFHPFVKEKSVRLIGVEAAGSGVNTDKHAATITKGSVGILHGSMSLLLQDKNGQVQEAHSISAGLDYPGVGPEHSYLKDIGRAEYGSVTDTEALNALKLVSELEGIIPALETAHAFAWLEKLCPTLEKNTEIVINCSGRGDKDVNTVASSLDI 414
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PROMS (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain AS9601) GN=trpB PE=3 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 9.094e-93 Identity = 163/226 (72.12%), Postives = 191/226 (84.51%), Query Frame = -1 Query: 159 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 836 KDATSEAIRDWV+NVETTHYILGSVAGPHP+P +VRDFHAVIG+ET++Q LE +G PD+L+ACVGGGSNAMGLFH FV + VRLIGVEAAG G+D+ KHAAT++KG VG+LHG++S LLQ+++GQ+ E HSISAGLDYPGVGPEHS LKD GRAEY +VTD EAL+A K S LEGIIPALETAHA A+L+KLCPTL T +V+N SGRGDKDV T L + Sbjct: 189 KDATSEAIRDWVSNVETTHYILGSVAGPHPFPKIVRDFHAVIGEETKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKETSVRLIGVEAAGSGVDTDKHAATITKGSVGILHGSMSLLLQDDNGQVQEAHSISAGLDYPGVGPEHSHLKDIGRAEYGSVTDQEALDALKLVSELEGIIPALETAHAFAWLDKLCPTLEKDTNIVINCSGRGDKDVNTVASSLDI 414 The following BLAST results are available for this feature:
BLAST of CN184827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 451
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184827 ID=CN184827; Name=CN184827; organism=Citrus sinensis; type=EST; length=836bpback to top |