CN184827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_STRCO (Tryptophan synthase beta chain OS=Streptomyces coelicolor GN=trpB PE=3 SV=2) HSP 1 Score: 296.204 bits (757), Expect = 1.506e-79 Identity = 142/223 (63.68%), Postives = 175/223 (78.48%), Query Frame = -1 Query: 168 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKY 836 KDA +EA RDWV NV+ THY+ G+VAGPHP+P MVRDFH VIG E RRQ LE+ G PD IACVGGGSNA+GLFH F+ D DVRLIG E AG G+++G+HAATL+ GE G+LHG+ SY+LQ+++GQI EP+SISAGLDYPG+GPEH++LKD GR EY VTDD A++A + SR EGIIPA+E+AHALA ++ L +VVN SGRGDKD+ TA +Y Sbjct: 180 KDAINEAFRDWVANVDRTHYLFGTVAGPHPFPAMVRDFHRVIGVEARRQLLEQAGRLPDAAIACVGGGSNAIGLFHAFIPDADVRLIGCEPAGHGVETGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHAYLKDSGRGEYRAVTDDAAMQALRLLSRTEGIIPAIESAHALAGALEVGRELGRDGLLVVNLSGRGDKDMDTAARY 402
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_OCHA4 (Tryptophan synthase beta chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpB PE=3 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 1.506e-79 Identity = 139/224 (62.05%), Postives = 176/224 (78.57%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDA +EA+RDWVTNVE T+Y++G+ AGPHPYP +VRDF +VIG E R+Q LE+ G PDV++A VGGGSNA+GLFH F++D V+++GVEA G GLD +H A++S G GVLHG +YLLQN+DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + DDEAL+AF+ +R EGIIPALE+AHA+A K+ PT+ ++VN SGRGDKDV T K L Sbjct: 179 KDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGNEARQQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDASVKIVGVEAGGRGLDGEEHCASMSAGRPGVLHGNRTYLLQNDDGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDDEALDAFQLCTRTEGIIPALESAHAIAQAVKMAPTMGKDQVMIVNLSGRGDKDVHTVGKLL 402
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_DECAR (Tryptophan synthase beta chain OS=Dechloromonas aromatica (strain RCB) GN=trpB PE=3 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.967e-79 Identity = 143/219 (65.30%), Postives = 176/219 (80.37%), Query Frame = -1 Query: 180 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 836 KDA +EA+RDWVTN+ T YI+G+VAGPHPYPM+VRDF +IG+E Q E G +PD +IACVGGGSNAMG+F+ ++N + VRLIGVEAAG G+++G+H+A+L+ G GVLHG +YLLQ+EDGQIIE HS+SAGLDYPGVGPEH++LKD GRAEY VTD EAL AF R+EGIIPALE++HALAY KL PTLA ++VN SGRGDKD+ T Sbjct: 172 KDALNEAMRDWVTNIHNTFYIIGTVAGPHPYPMLVRDFQKIIGEECLVQMPEMTGRQPDAVIACVGGGSNAMGIFYPYINVEGVRLIGVEAAGDGMETGRHSASLTAGVPGVLHGNRTYLLQDEDGQIIETHSVSAGLDYPGVGPEHAWLKDLGRAEYQPVTDSEALAAFHTLCRIEGIIPALESSHALAYAAKLAPTLAKDKILLVNLSGRGDKDMHT 390
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_STRAW (Tryptophan synthase beta chain OS=Streptomyces avermitilis GN=trpB PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.569e-79 Identity = 140/223 (62.78%), Postives = 174/223 (78.03%), Query Frame = -1 Query: 168 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKY 836 KDA +EA RDWV NV+ THY+ G+VAGPHP+P MVRDFH VIG E RRQ LE+ G PD +ACVGGGSNA+GLFH F+ D VRLIG E AG GL++G+HAATL+ GE G+LHG+ SY+LQ+++GQI EP+SISAGLDYPG+GPEH++LKD GR EY VTDD A++A + SR EGIIPA+E+AHALA ++ L ++VN SGRGDKD+ TA +Y Sbjct: 180 KDAINEAFRDWVANVDRTHYLFGTVAGPHPFPAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFIPDTGVRLIGCEPAGHGLETGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHAYLKDSGRGEYRAVTDDAAMQALRLLSRTEGIIPAIESAHALAGALEIGKELGKDGLILVNLSGRGDKDMDTAARY 402
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_CLOK5 (Tryptophan synthase beta chain OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpB PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.569e-79 Identity = 141/219 (64.38%), Postives = 175/219 (79.91%), Query Frame = -1 Query: 180 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 836 KDA +EA+R WV N+E T Y++GSV GPHPYP MVRDF +IG ET+ Q L+K G P+ +IACVGGGSN+MG+F+ FV DK V+LIGVEAAG G+D+ KHAA+++KG VGVLHG ++YL+Q+++GQI+ +S+SAGLDYPGVGPEH++LKD RAEY VTD EAL+AF SR EGIIPALE++HALAY KL P L+ VVVN SGRGDKDV T Sbjct: 170 KDAVNEALRKWVENIEDTFYVMGSVVGPHPYPTMVRDFQRIIGDETKEQILKKEGKLPNYIIACVGGGSNSMGIFYPFVEDKSVKLIGVEAAGLGVDTDKHAASMAKGSVGVLHGMMTYLIQDDEGQILPVYSVSAGLDYPGVGPEHAYLKDTKRAEYTYVTDQEALDAFGYLSRCEGIIPALESSHALAYTMKLAPELSKEEIVVVNISGRGDKDVDT 388
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_CLOK1 (Tryptophan synthase beta chain OS=Clostridium kluyveri (strain NBRC 12016) GN=trpB PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.569e-79 Identity = 141/219 (64.38%), Postives = 175/219 (79.91%), Query Frame = -1 Query: 180 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 836 KDA +EA+R WV N+E T Y++GSV GPHPYP MVRDF +IG ET+ Q L+K G P+ +IACVGGGSN+MG+F+ FV DK V+LIGVEAAG G+D+ KHAA+++KG VGVLHG ++YL+Q+++GQI+ +S+SAGLDYPGVGPEH++LKD RAEY VTD EAL+AF SR EGIIPALE++HALAY KL P L+ VVVN SGRGDKDV T Sbjct: 170 KDAVNEALRKWVENIEDTFYVMGSVVGPHPYPTMVRDFQRIIGDETKEQILKKEGKLPNYIIACVGGGSNSMGIFYPFVEDKSVKLIGVEAAGLGVDTDKHAASMAKGSVGVLHGMMTYLIQDDEGQILPVYSVSAGLDYPGVGPEHAYLKDTKRAEYTYVTDQEALDAFGYLSRCEGIIPALESSHALAYTMKLAPELSKEEIVVVNISGRGDKDVDT 388
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_STRGG (Tryptophan synthase beta chain OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpB PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.355e-79 Identity = 140/223 (62.78%), Postives = 174/223 (78.03%), Query Frame = -1 Query: 168 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKY 836 KDA +EA RDWV NV+ THY+ G+VAGPHP+P MVRDFH VIG E RRQ LE+ G PD +ACVGGGSNA+GLFH F+ D+ VRL+G E AG G+++G+HAATL+ GE G+LHG+ SY+LQ+++GQI EP+SISAGLDYPG+GPEHS+LKD GR EY VTDD A++A + SR EGIIPA+E+AHALA L L ++VN SGRGDKD+ TA +Y Sbjct: 180 KDAINEAFRDWVANVDRTHYLFGTVAGPHPFPAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFIPDEGVRLVGCEPAGHGVETGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHSYLKDVGRGEYRAVTDDAAMQALRLLSRTEGIIPAIESAHALAGALDLGKELGKDGLILVNLSGRGDKDMDTAARY 402
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PSESH (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola GN=trpB PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.355e-79 Identity = 144/224 (64.29%), Postives = 174/224 (77.68%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDA +EA+RDWVTNV+ T Y++G+VAGPHPYP MVRDF A+IGKET+ Q EK G PD LIACVGGGSNAMGLFH F++D V +IGVEA G G+D+ KHAA+L+ G GVLHG +YLLQ+ DGQI +PHSISAGLDYPG+GPEH+FL + R EY ++TDDEAL+AF + LEGIIPALETAHALA K L D +VV SGRGDKD+QT + ++ Sbjct: 175 KDAMNEALRDWVTNVDDTFYLIGTVAGPHPYPAMVRDFQAIIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDPHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNHM 398
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_NITMU (Tryptophan synthase beta chain OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=trpB PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.355e-79 Identity = 140/222 (63.06%), Postives = 177/222 (79.73%), Query Frame = -1 Query: 171 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 836 KDA +EA+RDWVTNV T YI+G+VAGPHPYPMMVRDF A+IG+E Q E +G +PD LIACVGGGSNA+GLF+ ++ D +R+IGVEAAG G+++ +HAATL+KG GVLHG +YL+Q+E+GQI+E HSISAGLDYPGVGPEH++LKD GRAEY+ +TD++ALEAF EGIIPALE++HALAY +L P L ++VN SGRGDKD+ T + Sbjct: 172 KDALNEAMRDWVTNVADTFYIIGTVAGPHPYPMMVRDFQAIIGREAITQMQEDYGRQPDALIACVGGGSNAIGLFYPYL-DSSIRMIGVEAAGHGVETDQHAATLTKGRPGVLHGNRTYLIQDENGQIVETHSISAGLDYPGVGPEHAWLKDSGRAEYFGITDEQALEAFHALCHYEGIIPALESSHALAYAARLAPALTSDKLLLVNLSGRGDKDMPTVAR 392
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_CAUCR (Tryptophan synthase beta chain OS=Caulobacter crescentus GN=trpB PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.355e-79 Identity = 144/224 (64.29%), Postives = 174/224 (77.68%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDA +EA+RDWVTNV T+Y++G+ AGPHPYP+MVRDF +VIG E R Q LE G PD ++AC+GGGSNA+GLFH F+ D+ VRLIGVEAAG G+ + KHAA+L+ G GVLHG +YLLQ++DGQII+ HSISAGLDYPG+GPEHSFL D GRAEY + TD EALEAFK S LEGIIPALE AHALA + ++ L G VV+N GRGDKD+ T + L Sbjct: 179 KDAMNEAMRDWVTNVHDTYYLIGTAAGPHPYPVMVRDFQSVIGAEAREQILEMEGRLPDAVVACIGGGSNAIGLFHPFLGDEGVRLIGVEAAGHGVSTDKHAASLTGGRPGVLHGNRTYLLQDDDGQIIDAHSISAGLDYPGIGPEHSFLHDIGRAEYVSTTDTEALEAFKLCSTLEGIIPALEPAHALARVGEIAQELGKGKIVVMNLCGRGDKDIFTVAEAL 402 The following BLAST results are available for this feature:
BLAST of CN184827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 451
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184827 ID=CN184827; Name=CN184827; organism=Citrus sinensis; type=EST; length=836bpback to top |