CN184827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_THIDA (Tryptophan synthase beta chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=trpB PE=3 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.381e-79 Identity = 142/222 (63.96%), Postives = 173/222 (77.93%), Query Frame = -1 Query: 171 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 836 KDA +EA+RDWVTNVE+T YILG+ AGPHPYPM+VRDF VIG+E Q E G +PD ++ACVGGGSNA+G+FH ++ ++VRLIGVEA G G+ SGKHAA L+ G GVLHG SYL+Q+E+GQIIE HS+SAGLDYPGVGPEHS+LKD GRAEY + DDEAL AF R EGIIPALE++HA+A +KL PT+ ++VN SGRGDKD+ T K Sbjct: 172 KDALNEAMRDWVTNVESTFYILGTAAGPHPYPMLVRDFQCVIGRECIAQMPELVGRQPDAVVACVGGGSNAIGIFHPYIPHENVRLIGVEAGGSGVASGKHAAPLTAGTPGVLHGFRSYLMQDENGQIIETHSVSAGLDYPGVGPEHSYLKDAGRAEYVPINDDEALAAFHDLCRFEGIIPALESSHAVAQAKKLAPTMKKDQVILVNLSGRGDKDINTVAK 393
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_BACC3 (Tryptophan synthase beta chain OS=Bacillus cereus (strain 03BB102) GN=trpB PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.275e-78 Identity = 138/225 (61.33%), Postives = 181/225 (80.44%), Query Frame = -1 Query: 162 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 836 KDA +EA+R WV++V THYI+GSV GPHP+P +VRDF +VIG ET++Q E G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQNE+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 171 KDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEELEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_BACAH (Tryptophan synthase beta chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpB PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.275e-78 Identity = 138/225 (61.33%), Postives = 181/225 (80.44%), Query Frame = -1 Query: 162 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 836 KDA +EA+R WV++V THYI+GSV GPHP+P +VRDF +VIG ET++Q E G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQNE+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 171 KDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEELEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_BACCZ (Tryptophan synthase beta chain OS=Bacillus cereus (strain ZK / E33L) GN=trpB PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.665e-78 Identity = 138/225 (61.33%), Postives = 181/225 (80.44%), Query Frame = -1 Query: 162 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 836 KDA +EA+R WV++V THYI+GSV GPHP+P +VRDF +VIGKET++Q G P+ ++AC+GGGSNAMG+F+ FV+D++V L GVEAAG G+ + KHAATL+KG VGVLHG++ YLLQNE+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 171 KDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_ALKMQ (Tryptophan synthase beta chain OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpB PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.665e-78 Identity = 139/224 (62.05%), Postives = 173/224 (77.23%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDAT+EAIRDWV NV+ T+Y++GSV GPHPYP MVRDF +IG E + Q LEK G P+ L+ACVGGGSNAMGLF+ F D+ V L GVEAAG G+++ +HAAT++KG +GV+HG ++YLLQ+E GQI HSISAGLDYPG+GPEH++ GRA Y +TD+EALEAF+ +RLEGIIPALE+AHA+AYL KL P +V+N SGRGDKD+ T K L Sbjct: 170 KDATNEAIRDWVANVKDTYYVIGSVVGPHPYPTMVRDFQRIIGDEVKEQILEKEGRLPNYLVACVGGGSNAMGLFYPFYEDEAVALYGVEAAGLGVETDQHAATITKGSMGVIHGMMTYLLQDEQGQITPVHSISAGLDYPGIGPEHAYYHHTGRANYVAITDEEALEAFQLLTRLEGIIPALESAHAIAYLMKLAPKTKGDDIIVLNLSGRGDKDIHTISKLL 393
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRKO (Tryptophan synthase beta chain 1 OS=Pyrococcus kodakaraensis GN=trpB1 PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.665e-78 Identity = 139/217 (64.06%), Postives = 172/217 (79.26%), Query Frame = -1 Query: 186 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDV 836 KDA +EA+RDWV E +HY++GSV GP+PYP++VRDF +VIG+E R Q LE G PD ++ACVGGGSNAMG+F+ FVND+ VRLIGVEA G GL++G HAA+L+ GE+GV HG LSY LQNE+GQI HS+SAGLDYPGVGPEH++LKD GRAEY VTD+EAL AF SR EGI+PALE+AHA+AY K+ P + ++VN SGRGDKD+ Sbjct: 165 KDAINEALRDWVATFEYSHYLIGSVVGPYPYPVIVRDFQSVIGREAREQILEAEGTLPDAVVACVGGGSNAMGIFYPFVNDR-VRLIGVEAGGKGLETGLHAASLNAGELGVFHGMLSYFLQNEEGQITPTHSVSAGLDYPGVGPEHAYLKDSGRAEYVTVTDEEALRAFHELSRTEGILPALESAHAVAYAMKIAPEMDKDEIIIVNLSGRGDKDL 380
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRFU (Tryptophan synthase beta chain 1 OS=Pyrococcus furiosus GN=trpB1 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.174e-78 Identity = 139/222 (62.61%), Postives = 173/222 (77.93%), Query Frame = -1 Query: 171 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 836 KDA +EA+RDWV E THY++GSV GPHPYP +VRDF +VIG+E + Q LE G PDV++ACVGGGSNAMG+F+ FVNDK V+L+GVEA G GL+SGKH+A+L+ G+VGV HG LSY LQ+E+GQI HSI+ GLDYPGVGPEH++LK RAEY VTD+EAL+AF SR EGIIPALE+AHA+AY KL ++ ++VN SGRGDKD+ +K Sbjct: 162 KDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLK 383
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PSE14 (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpB PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.840e-78 Identity = 143/224 (63.84%), Postives = 173/224 (77.23%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDA +EA+RDWVTNV+ T Y++G+VAGPHPYP MVRDF A+IGKET+ Q EK G PD LIACVGGGSNAMGLFH F++D V +IGVEA G G+D+ KHAA+L+ G GVLHG +YLLQ+ DGQI + HSISAGLDYPG+GPEH+FL + R EY ++TDDEAL+AF + LEGIIPALETAHALA K L D +VV SGRGDKD+QT + ++ Sbjct: 175 KDAMNEALRDWVTNVDDTFYLIGTVAGPHPYPAMVRDFQAIIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDAHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNHM 398
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PSEU2 (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpB PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.709e-78 Identity = 142/224 (63.39%), Postives = 173/224 (77.23%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDA +EA+RDWVTNV+ T Y++G+VAGPHPYP MVRDF A+IGKET+ Q LEK G PD L+ACVGGGSNAMGLFH F++D V +IGVEA G G+ + KHAA+L+ G GVLHG +YLLQ+ DGQI + HSISAGLDYPG+GPEH+FL + R EY ++TDDEAL+AF + LEGIIPALETAHALA K L D +VV SGRGDKD+QT + ++ Sbjct: 175 KDAMNEALRDWVTNVDDTFYLIGTVAGPHPYPAMVRDFQAIIGKETKEQMLEKEGRLPDSLVACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVSTDKHAASLNGGVPGVLHGNRTYLLQDGDGQITDAHSISAGLDYPGIGPEHAFLHEVKRVEYVSITDDEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNHM 398
BLAST of CN184827 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPU (Tryptophan synthase beta chain OS=Pseudomonas putida GN=trpB PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.709e-78 Identity = 141/224 (62.95%), Postives = 175/224 (78.12%), Query Frame = -1 Query: 165 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVNDKDVRLIGVEAAGFGLDSGKHAATLSKGEVGVLHGALSYLLQNEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 836 KDA +EA+RDWVTNVE T Y++G+VAGPHPYP MVRDF ++IGKETR Q EK G PD L+ACVGGGSNAMGLFHEF+ + V++IGVEA G G+ + KHAA+L+ G GVLHG +YLLQ+EDGQI + HSISAGLDYPG+GPEH++L + R EY ++TDDEAL+AF + RLEGIIPALE++HALA K P L +VV SGRGDKD+QT + ++ Sbjct: 175 KDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGGSNAMGLFHEFLEEPSVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDEDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVVCLSGRGDKDMQTVMNHM 398 The following BLAST results are available for this feature:
BLAST of CN184827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 451
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184827 ID=CN184827; Name=CN184827; organism=Citrus sinensis; type=EST; length=836bpback to top |