CN184825

Overview
NameCN184825
Unique NameCN184825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.169e-11
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            Y+N +   IP ELGN+ S+I L L ++ ++  IP S  NLK+L +L L  + LTG IP +L  + S+  +D+S N L G++P S
Sbjct:  350 YENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQNKLTGSVPDS 433          

HSP 2 Score: 67.781 bits (164), Expect = 1.993e-11
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            Y+N +   IP E+GN+ S+ +L L  + ++  IP SL NLK+L  L L  + LTG IP +L  I S+  +++S+N L G+IP+S
Sbjct:  254 YENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSS 337          

HSP 3 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            Y+N +   IP ELGN+ S+  L L  + ++  IP +L NLK+L+ L L ++ LTG IP ++  + S+T + +S N L G+IP+S
Sbjct:  206 YENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLGNLKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSS 289          

HSP 4 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            N +  TIP + GNL+ LI  DL  + ++ +I PSL NLK+L  L L+ + LT  IP++L  + S+T + +S N L G+IP+S
Sbjct:  112 NLLSGTIPPQFGNLSKLIYFDLSTNHLTGEISPSLGNLKNLTVLYLHQNYLTSVIPSELGNMESMTDLALSQNKLTGSIPSS 193          

HSP 5 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 33/84 (39.29%), Postives = 56/84 (66.67%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            ++N +   IP +LGN+ S+I L+L ++ ++  IP SL NLK+L  L L ++ LTG IP +L  + S+  + +++N L G+IP+S
Sbjct:  302 FQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSS 385          

HSP 6 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            ++N +   IP ELGN+ S+  L L  + ++  IP SL NLK+L+ L L ++ LTG IP +L  + S+T + +S N L G+IP++
Sbjct:  158 HQNYLTSVIPSELGNMESMTDLALSQNKLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPST 241          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.169e-11
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPF 263
            Y+N     +PVE+GN   L  +D Y + +S +IP S+  LK L  L L ++ L G IP  L     +TV+D++ N L G+IP+S  F
Sbjct:  441 YENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSSFGF 527          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.603e-11
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTS 254
            N+ + +IP  LG+  +L+++DL  + ++  IPP L NL+SL  L L+ + L G +P+QL G + L   DV SN L G+IP+S
Sbjct:  493 NSFEGSIPRSLGSCKNLLTIDLSQNKLTGLIPPELGNLQSLGLLNLSHNYLEGPLPSQLSGCARLLYFDVGSNSLNGSIPSS 574          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIP 248
            NN+   IP ++G L+SL  LDL  +++S  IPPSL +LK L ++ L  + L+GQIP  +  + +L  +D S N L G IP
Sbjct:  227 NNLSGEIPYQIGGLSSLNHLDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDNSLSGEIP 306          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRLERPQLLALASYDTNCSQTID 365
            NNI   IP  +   ++LIS+DL  + ++ +IP  + N+K+L  L ++ + LTG IPT +  ++SLT +D+S NDL G +P    F       F  N  L  P  +   S  T   QT D
Sbjct:  514 NNITGGIPDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGSIPTGIGNMTSLTTLDLSFNDLSGRVPLGGQFLVFNETSFAGNTYLCLPHRV---SCPTRPGQTSD 629          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIP 248
            + N I   IP +LGNL +L  LDL  +  +  IP S  NL  L  L LN++LLTGQIP  +  +  LT++D+S N L G IP
Sbjct:  508 HNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIP 589          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPFEHITLNDFEKNPRLE 308
            NN+  TIP  +G  +SL  LDL  + +   IP SL NL+ L  L L ++ L G +PTQ     SL+ VDVS NDL G++P+     ++ LN    N  LE
Sbjct:  300 NNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQKG--QSLSNVDVSYNDLSGSLPSWVSLPNLNLNLVANNFTLE 397          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 3
Query:    9 NNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPT 251
            N I+ T+P EL  L  L  +D+  + VS  IP +L N+ SL+ L L+ + LTG+IP  +  + SL   +VS N+L G +PT
Sbjct:  280 NRIRGTLPSELSKLTKLRKMDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPVPT 360          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 3
Query:    3 YKNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPF 263
            Y+N     IP E+GN  SL  +D++ +    +IPPS+  LK L  L L  + L G +P  L     L ++D++ N L G+IP+S  F
Sbjct:  440 YENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIGRLKELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQLSGSIPSSFGF 526          
BLAST of CN184825 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 3
Query:    6 KNNIQRTIPVELGNLNSLISLDLYDSDVSKKIPPSLANLKSLVFLRLNDHLLTGQIPTQLVGISSLTVVDVSSNDLCGTIPTSAPF 263
            +N ++  IP E+GN +SL+ L+LYD+ ++ KIP  L NL  L  LR+  + LT  IP+ L  ++ LT + +S N L G I     F
Sbjct:  249 ENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGF 334          
The following BLAST results are available for this feature:
BLAST of CN184825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
Y1571_ARATH1.169e-1141.67Probable leucine-rich repeat receptor-like protein... [more]
GSO2_ARATH1.169e-1139.08LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR2_ARATH2.603e-1141.46Leucine-rich repeat receptor-like protein kinase P... [more]
Y2579_ARATH4.441e-1142.50Probably inactive leucine-rich repeat receptor-lik... [more]
CLV1_ARATH4.441e-1135.29Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y1341_ARATH7.575e-1145.12Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH9.893e-1141.00Probable LRR receptor-like serine/threonine-protei... [more]
IMK3_ARATH9.893e-1140.74Probable leucine-rich repeat receptor-like protein... [more]
GSO1_ARATH9.893e-1136.78LRR receptor-like serine/threonine-protein kinase ... [more]
FLS2_ARATH9.893e-1139.53LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006C23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184825 ID=CN184825; Name=CN184825; organism=Citrus sinensis; type=EST; length=382bp
TTTACAAAAACAACATCCAACGAACTATCCCTGTCGAGCTCGGTAACTTG
AACAGCCTCATCTCCTTGGACTTGTATGATAGCGACGTCTCGAAGAAAAT
CCCTCCTTCCTTGGCTAACTTGAAATCTCTTGTTTTTTTGCGGCTTAACG
ATCATCTACTAACTGGACAAATTCCCACGCAACTTGTTGGAATTTCAAGT
CTCACAGTTGTGGATGTTTCAAGCAATGATCTGTGTGGAACAATTCCTAC
AAGCGCACCATTTGAACACATCACACTCAACGACTTTGAGAAGAACCCTC
GATTAGAACGTCCACAGTTGCTGGCACTTGCAAGTTATGACACAAACTGC
TCACAGACGATTGATTGTTGCTTCAAGCTCTA
back to top