CN184817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_AMOA5 (Serine hydroxymethyltransferase OS=Amoebophilus asiaticus (strain 5a2) GN=glyA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.223e-31 Identity = 67/151 (44.37%), Postives = 100/151 (66.23%), Query Frame = -3 Query: 253 TRSDVCPMKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP-GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVK 702 T+ + M T ++ +VFPG+QGGP H I+ A+A ++ + +Y Y QV N+ + AQS ++RGY++VSGGT+NHL+L++LRNKGI G E+ L I NKN VP D S ++ GIR+GTPA+T+RG E D E++A + + +K Sbjct: 247 TKGKLKSMSTLLDASVFPGIQGGPLEHIIAAKAIAFQEAMSDDYFNYILQVQKNTRQLAQSFVKRGYNIVSGGTDNHLILIDLRNKGITGKLAEEALIKASITLNKNMVPFDDQSPLITSGIRIGTPAVTTRGMQETDMEQIAAWIDDVLK 397
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 65/133 (48.87%), Postives = 97/133 (72.93%), Query Frame = -3 Query: 277 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVA 672 KI++AVFPG+QGGP H I+ AV K+ TPE+KAYQ+ +++N++ A++L+E+G +VSGGT+NHL+LV++R KG++G E +LES++I NKN +P D V GIR+GTPA+TSR +D ++A Sbjct: 249 KIDKAVFPGIQGGPLMHVIAAKAVCFKEALTPEFKAYQQDIVNNAAILAKALMEQGLRVVSGGTDNHLMLVDVRPKGLNGRDAEAILESINITVNKNAIPFDPEKPTVTSGIRVGTPAVTSRALKGDDMRELA 381
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_POLNS (Serine hydroxymethyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 74/186 (39.78%), Postives = 109/186 (58.60%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN AVFPGLQGGP H I+ AVA K+ P +K YQ+QV++N+ A++L+ RG +VSGGT++H++LV+LR K + G E+VL HI NKN +P D MV GIR+G+PA+T+RGF E + +V +F+A ++ + + + I+ +R +V KRFP Sbjct: 249 INFAVFPGLQGGPLMHVIAAKAVAFKEAAEPGFKDYQKQVVANAKALAETLIARGLRIVSGGTDSHVMLVDLRAKSMTGKEAERVLGEAHITCNKNGIPNDPEKPMVTSGIRLGSPAMTTRGFKEAEARQVG-----------------------NFIADVLDNPNDPANIAKVRAQVAELTKRFP 411
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_ONYPE (Serine hydroxymethyltransferase OS=Onion yellows phytoplasma GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 65/142 (45.77%), Postives = 99/142 (69.72%), Query Frame = -3 Query: 256 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKG--IDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAV 672 KIN+ +FPG+QGGP HTI+ AVA ++ P +K YQ+QV+ N++ FA++ ++GY +VSGGT+NHL L+++++K GS++ +LE ++I NKNT+P D V GIR+GTPA+T+ GF E DF VA+ + A+ Sbjct: 250 KINRGIFPGIQGGPCIHTIAAKAVAFQEAMMPSFKEYQKQVIKNANTFAKAFQQKGYRIVSGGTDNHLFLIDVKHKNPEFTGSKIANMLEKINIVVNKNTIPFDQEKPFVTSGIRIGTPAMTTVGFRENDFILVADLMDKAI 391
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_LYSSC (Serine hydroxymethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 67/141 (47.52%), Postives = 95/141 (67.38%), Query Frame = -3 Query: 253 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVK 672 K+N++VFPG+QGGP H I+ AVA +V PE+K Y +Q+ N+ A+ L+ G ++VSGGT+NHL+L+N+++ G+ G E L+ V I NKNT+P D S V GIR+GTPA+TSRGF EED ++V A +K Sbjct: 247 KLNKSVFPGIQGGPLMHVIAAKAVAFGEVLQPEFKDYAKQIKLNAKALAEVLIAEGVEIVSGGTDNHLLLLNVKSLGLTGKVAEHALDEVGITTNKNTIPYDTESPFVTSGIRIGTPAVTSRGFKEEDMKEVGAIIAAVLK 387
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_IDILO (Serine hydroxymethyltransferase OS=Idiomarina loihiensis GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 76/198 (38.38%), Postives = 113/198 (57.07%), Query Frame = -3 Query: 106 SDVCPMKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 696 SD + K+N AVFPG QGGP H I+G AVA ++ PE+K YQ+QVL N++ +++ RGY +VS GT+NHL LV+L +K I G + L + I NKN VP D S V G+R+GTPA+T RGF E + E+VA +++ ++ D + +S+I+ +R++V+ +FP G Sbjct: 244 SDDEKLHKKLNSAVFPGNQGGPLCHVIAGKAVAFQEALQPEFKDYQKQVLVNANAMVKTMQARGYKIVSNGTQNHLFLVDLIDKDITGKDADAALGNAFITVNKNAVPNDPRSPFVTSGLRLGTPAITRRGFKEAEAEQVA-----------------------NWICDVLDDIADESKINQVREQVKALCAKFPVYG 418
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_CAMFF (Serine hydroxymethyltransferase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 72/156 (46.15%), Postives = 97/156 (62.18%), Query Frame = -3 Query: 208 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLK 672 KIN ++FPG+QGGP H I+G AV K + E+K Y +QV +N+ K + L+ RGYDLVSGGT+NHLVLV+ NK G + L + I NKNTVPG+ S + GIR+G+PALT+RG E +FE +A N + I +K K+K Sbjct: 244 KINSSIFPGIQGGPLMHVIAGKAVGFKHNLSDEWKVYAKQVKTNAKKLGEVLINRGYDLVSGGTDNHLVLVSFLNKEFSGKDADIALGNAGITVNKNTVPGETRSPFITSGIRVGSPALTARGMKESEFELIA---NRIADVLDDIDNSSKQEKIK 396
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_THEM4 (Serine hydroxymethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31 Identity = 74/181 (40.88%), Postives = 108/181 (59.67%), Query Frame = -3 Query: 130 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVY 669 IN+++FPG+QGGP H I+ AV K+ T E+KAYQ QV+ N+ K A+ L +RG +VSGGT+ HL+LV+L + G E L H+ NKNT+P + S V GIR+GTPALT+RG E + E++AE VK+ +K D +G V E +Q ++ +L ++ +Y Sbjct: 248 INKSIFPGIQGGPLMHVIAAKAVCFKEALTDEFKAYQNQVVKNAKKLAEELEKRGLRIVSGGTDTHLMLVDLNPLNVTGKAAEIALGKCHVTVNKNTIPNETRSPFVASGIRLGTPALTTRGMKESEMEEIAELI---VKVLENVK-DEEGNVDDSIV------EDVQKKVRDLCERFPLY 418
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_MARAV (Serine hydroxymethyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31 Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = -3 Query: 106 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 681 ++ K+N AVFPG QGGP H I+ AV K+ + E+KAYQ+QV+ N++ A+ +ERG+D+VSGGT+NHL LV+L + I G + L HI NKN VP D S V G+R+GTPA+T+RGF E + +A + + D + L DE++ S + R++VE RFP G Sbjct: 248 LQKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMSDEFKAYQQQVVKNAAAMAEVFIERGFDVVSGGTKNHLFLVSLIKQDITGKDADAALGKAHITVNKNAVPNDPRSPFVTSGLRIGTPAVTTRGFKEAECRNLAGW-------------------MCDILDNL-EDEAVNSRV---REQVEAVCARFPVYG 417
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_LAWIP (Serine hydroxymethyltransferase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31 Identity = 72/186 (38.71%), Postives = 110/186 (59.14%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN +FPG+QGGP H I+ AVAL + + YQ+QV+ N+ A+ LL+ G++LVSGGT+NHL+L++L NK I G EK L+ I NKNTVP + +S V GIR+GTPALT+RG E+D KVA +++ T +++ + ++++ + +V +A++FP Sbjct: 246 INSQIFPGIQGGPLMHVIAAKAVALGEASKASFVTYQKQVILNAKTLAKQLLDAGFNLVSGGTDNHLLLIDLTNKKITGKDAEKALDQAGITVNKNTVPFETLSPFVTSGIRIGTPALTTRGLCEQDMIKVA-----------------------NWIVTALNNINNETQLKEINKEVTYFARQFP 408 The following BLAST results are available for this feature:
BLAST of CN184817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184817 ID=CN184817; Name=CN184817; organism=Citrus sinensis; type=EST; length=734bpback to top |