CN184817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50 Identity = 104/191 (54.45%), Postives = 138/191 (72.25%), Query Frame = -3 Query: 118 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKG---DTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRF 681 ++ KIN +VFPG QGGPHNHTI+ LAVAL Q KTPE+ YQ+ VLSN+ A + + RGY LVSGGT+ HLVLV+L +KG+DG+RVE++LE V+I+ANKNTVPGD SA++P G+R+GTPA T+RGF E+DFE+V E + V L KI +K +DF A + D S SEI+ L+ +V +A +F Sbjct: 279 LEDKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDFKA-YVGDGSKFSEIAKLKKEVITWAGKF 468
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 6.455e-49 Identity = 98/191 (51.31%), Postives = 136/191 (71.20%), Query Frame = -3 Query: 115 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 681 ++ KIN +VFPG QGGPHNHTI+ LAVALKQ +PE+K YQ++V++N+ + L E GY LVS GT++H+VLV+LR G+DG+RVE +LE ++I NKN VPGD SA+ PGG+R+GTPA+TSRGF E DFEKVA F + AVKL +I+ + K KDF A + + + I+ L+ ++ ++ FP Sbjct: 280 LEDKINFSVFPGHQGGPHNHTITALAVALKQAASPEFKEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQINITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQASLPKEANKQKDFKAKIATSDI--PRINELKQEIAAWSNTFP 468
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 6.526e-49 Identity = 94/195 (48.21%), Postives = 139/195 (71.28%), Query Frame = -3 Query: 106 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESI---QSEISNLRDKVEVYAKRFPTVG 681 ++ KIN +VFPG QGGPHNHTI +AVALKQ +PE+K YQ++++ NS FAQ L + GY LVSGGT+NHL++++L +DG+RVE +L +++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF E+F +VA++ ++AVKLA +K TKL D + L + + SE++ L ++ + ++P G Sbjct: 295 LEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKL-DARSRLNEFKKLCNESSEVAALSGEISKWVGQYPVPG 488 HSP 2 Score: 26.1794 bits (56), Expect = 6.526e-49 Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = -1 Query: 681 RKGVKEINKQGQEVMYAL 734 RKG+K + K+G+E+ Y L Sbjct: 278 RKGIKSVTKKGKEIPYEL 295
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 7.083e-48 Identity = 95/193 (49.22%), Postives = 133/193 (68.91%), Query Frame = -3 Query: 106 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKG----DTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 672 +IN +VFP QGGPHNHTIS LAVALKQ TPE+K YQ V+ N+ F + L +RG+ LVSGGT+ HL+L++L GIDGSR+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF +F +VA + N AVKLA+ +K D K K + +A S + +++ L ++V + ++P G Sbjct: 305 RINFSVFPAHQGGPHNHTISALAVALKQAATPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQEPVDAKDAKTR--LAHFKSFCAESEQVTKLANEVADWVAQYPVPG 495 HSP 2 Score: 26.9498 bits (58), Expect = 7.083e-48 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = -1 Query: 681 RKGVKEINKQGQEVMYAL 734 RKG++++ K+G E+MY L Sbjct: 285 RKGIRKVTKKGTEIMYDL 302
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 1.590e-47 Identity = 93/191 (48.69%), Postives = 131/191 (68.59%), Query Frame = -3 Query: 115 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 681 ++ IN +VFPG QGGPHNHTI+ LA ALKQ TPE+K YQEQVL N+ ++GY LVS GT++H+VLV+L++K IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF+K+ + + AV A +++ KLKDF + D ++ +RD++ +A FP Sbjct: 280 LENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQVLKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGD---SEKLKAVRDEIYQWAGSFP 467
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.916e-46 Identity = 91/191 (47.64%), Postives = 129/191 (67.54%), Query Frame = -3 Query: 115 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 681 ++ IN +VFPG QGGPHNHTI+ LA ALKQ TPE+K YQ QVL N+ GY LVS GT++H+VLV+LR KG+DG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ + + AVK A + + + KLKDF A + + I +++ L+ ++ + +P Sbjct: 279 LENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKAKV---DEIADQLAPLKKEIYDWTAEYP 466
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45 Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = -3 Query: 115 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 681 ++ KIN +VFPG QGGPHNHTI+ LAVALKQ + P YK YQ QV+ N+ + +RGY L + GT++H+VLV++++KG+DG+R E+VLE ++I NKNTVP D SA P GIR+GTPA+T+RGF E+DF +V ++ + A+ A ++ + KLKDF A L E E+ L+ +V +A FP Sbjct: 273 LEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQ-YPELVQLQKEVAEWASSFP 462
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45 Identity = 92/187 (49.20%), Postives = 127/187 (67.91%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN +VFPG QGGPHNHTIS LA ALKQ TPE++ YQE VL N+ + Y LVS GT++H+VLV+LR KG+DG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ + N AV++A I+ + +LKDF A + E EI+ L ++ + + +P Sbjct: 283 INFSVFPGHQGGPHNHTISALATALKQATTPEFREYQELVLKNAKVLETEFKKLNYRLVSDGTDSHMVLVSLREKGVDGARVEHVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQSLPKEANRLKDFKAKV---EGGTDEIAQLAQEIYSWTEEYP 466
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.315e-45 Identity = 93/186 (50.00%), Postives = 128/186 (68.82%), Query Frame = -3 Query: 130 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSEISNLRDKVEVY 681 ++ IN +VFPG QGGPHNHTI+ LA ALKQ TPE+K YQ QVL N+ GY LVS GT++H+VLV+LR KG+DG+RVE + E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ ++ N AV+ A +++ +LKDF A + DE S++ N K E+Y Sbjct: 279 LENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKV--DEG--SDVLNTWKK-EIY 459
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.376e-43 Identity = 85/192 (44.27%), Postives = 128/192 (66.67%), Query Frame = -3 Query: 106 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 681 ++ +IN AVFP QGGPH +TI+G+AVALK+ +P+++ Y +QV NS + L +RGY LV+ GT+NHLVL +LR +GI GS++EK + HI NKN V GD +A+ PGG+R+G PALTSRG E+DF KV +F + VK++L I+ G K+ DF + ++ ++ +R +V+ ++ +F G Sbjct: 293 LENRINFAVFPSCQGGPHENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKV-GKKMPDFQRAIADNQ----DLKQIRQEVKEFSTKFGMPG 479 The following BLAST results are available for this feature:
BLAST of CN184817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184817 ID=CN184817; Name=CN184817; organism=Citrus sinensis; type=EST; length=734bpback to top |