CN184817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_CUPTR (Serine hydroxymethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33 Identity = 74/189 (39.15%), Postives = 111/189 (58.73%), Query Frame = -3 Query: 106 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 669 IN ++FPG+QGGP H I+G AVA K+ TPE+KAYQ+QV+ N++ A++L+ RG +VSG TE+H++LV+LR K I G E++L H+ NKN +P D V GIR+G+PA+T+RGF EE+ V + +A ++ + + I+ +R++V KRFP G Sbjct: 250 INSSIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQQQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHLTVNKNAIPNDPEKPFVTSGIRVGSPAMTTRGFKEEEARIVG-----------------------NLIADVLDNPHDAANIAAVREQVSALTKRFPVYG 415
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_ACISJ (Serine hydroxymethyltransferase OS=Acidovorax sp. (strain JS42) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33 Identity = 77/186 (41.40%), Postives = 106/186 (56.99%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN A+FPGLQGGP H I+ AVA K+ +PE+K YQ+QV N+ FA++L++RG +VSG TE+H++LV+LR KGI G E L HI NKN +P D MV GIR+GTPA+T+RGF EE+ A + VA ++ + ++ + +R KV RFP Sbjct: 249 INSAIFPGLQGGPLEHVIAAKAVAFKEALSPEFKQYQQQVTKNAKVFAETLIQRGLRIVSGRTESHVMLVDLRAKGITGKEAEAALGKAHITINKNAIPNDPEKPMVTSGIRVGTPAITTRGFKEEETRLTA-----------------------NLVADVLDNPHDEANLEAVRAKVHALTSRFP 411
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_RALEH (Serine hydroxymethyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33 Identity = 74/189 (39.15%), Postives = 110/189 (58.20%), Query Frame = -3 Query: 106 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 669 IN A+FPG+QGGP H I+G AVA K+ TPE+K YQ+QV+ N++ A++L+ RG +VSG TE+H++LV+LR K I G E++L HI NKN +P D V GIR+G+PA+T+RGF EE+ V + +A ++ + + I+++R++ KRFP G Sbjct: 250 INSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKEYQQQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEEEARIVG-----------------------NLIADVLDNPHDAANIASVREQAAALTKRFPVYG 415
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_STRM5 (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = -3 Query: 106 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 672 K+ VFPG+QGGP H I+G AVA K+ P +KAYQ+QV+ N+ A +L+ RGY +VSGGT+NHL+LV++ K + G E L HI NKN+VP D S V G+R+GTPA+T+RG+VE+D L +++A ++ S + I+ +RD V +++P G Sbjct: 251 KLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMANTLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAVTTRGYVEQDC-----------------------VDLANWIADVLDAPSDDAVIARVRDAVSAQCRKYPVYG 417
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_RHOFD (Serine hydroxymethyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 77/189 (40.74%), Postives = 108/189 (57.14%), Query Frame = -3 Query: 106 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 669 IN A+FPGLQGGP H I+ AVA K+ PE+K YQ+QVL+N+ A++L+ RG +VSG TE+H++LV+LR+K I G E VL S H+ NKN +P D MV G+R+GTPA+T+RGF +E+ A + +A ++ + + I +R KV KRFP G Sbjct: 249 INSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLVSRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEEARITA-----------------------NLIADVLDNPRDSANIDAVRAKVNALTKRFPVYG 414
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA1_RALSO (Serine hydroxymethyltransferase 1 OS=Ralstonia solanacearum GN=glyA1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 77/186 (41.40%), Postives = 109/186 (58.60%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN A+FPG+QGGP H I+G AVA K+ ++P +KAYQEQV+ N+ A++L+ RG +VSG TE+H++LV+LR K I G EKVL HI NKN +P D V GIR+G+PA+T+RGF E + KVA +A ++ + ++ I+ +R KV K+FP Sbjct: 250 INSAIFPGIQGGPLMHVIAGKAVAFKEAQSPTFKAYQEQVVKNARAMAETLMARGLRIVSGRTESHVMLVDLRAKSITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEGEAVKVAH-----------------------LIADVLDNPHDEANIAAVRAKVAELTKQFP 412
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_POLNA (Serine hydroxymethyltransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glyA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 77/189 (40.74%), Postives = 106/189 (56.08%), Query Frame = -3 Query: 106 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 669 IN A+FPGLQGGP H I+ A+A K+ +PE+K YQ+QVL N+ A++L +RG +VSG TE+H++LV+LR KGI G E VL S H+ NKN +P D MV G+R+GTPA+T+RGF GD + + VA ++ + + I +R KV RFP G Sbjct: 249 INSAIFPGLQGGPLMHVIAAKAIAFKEALSPEFKIYQQQVLKNAQIVAETLTQRGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGF-----------------------GDEEARMTANLVADVLDNPRDAANIEAVRAKVHALTSRFPVYG 414
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_DICTD (Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=glyA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = -3 Query: 124 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAK 672 +I++AVFPG+QGGP H I+ AVA K+ +PE+K YQ+Q++ N+ A+ L++ GY LVSGGT+NHL+LV+LR+KGI G EK LE I NKN +P D + GIR+GTPALT+RG E++ +A +L ++ + K ++K E ++ E+ L + +Y K Sbjct: 245 EIDKAVFPGIQGGPLMHVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTITSGIRIGTPALTTRGMKEDEMRYIA-------RLIHEVLSNFKDERVK---------EKVKKEVEELCKQFPIYRK 412
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33 Identity = 70/142 (49.30%), Postives = 100/142 (70.42%), Query Frame = -3 Query: 274 VCPMK--TKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFEKVAE 690 +CP + I++AVFPG+QGGP H I+ AVAL + + PE+K YQEQ++ N+ AQ+L ERG++LV+GGT+ HL+LV+LRNKG+ G+ E +L+ V + NKN VP D V GIR+GTPA+T+RG E+ ++AE Sbjct: 240 LCPEEYAAAIDKAVFPGIQGGPLMHVIAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIAE 381
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_RICCK (Serine hydroxymethyltransferase OS=Rickettsia canadensis (strain McKiel) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = -3 Query: 277 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVA 672 KIN A+FPGLQGGP H I+ AVA ++ P+YK+Y +QV+SN+ A+ L ERGYD+++GGT+NH+VLV+LR GI G L+ I NKNT+P D S + GIR+GTPA T+RGF E+DF VA Sbjct: 250 KINSALFPGLQGGPLMHVIAAKAVAFQEALQPKYKSYIQQVISNAEALARILQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNTIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVA 382 The following BLAST results are available for this feature:
BLAST of CN184817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184817 ID=CN184817; Name=CN184817; organism=Citrus sinensis; type=EST; length=734bpback to top |