CN184817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_POLSJ (Serine hydroxymethyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN A+FPGLQGGP H I+ AVA K+ +PE+K YQ+QVL+N+ A++L +RG +VSG TE+HL+LV+LR KGI G E VL S H+ NKN +P D MV G+R+GTPA+T+RGF +E+ A + +A ++ + + I +R KV RFP Sbjct: 249 INSAIFPGLQGGPLMHVIAAKAVAFKEALSPEFKTYQQQVLTNARIVAETLTQRGLRIVSGRTESHLMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEEARVTA-----------------------NLIADVLDNPRDAANIEAVRAKVNALTSRFP 411
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_DESHY (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glyA PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 71/164 (43.29%), Postives = 108/164 (65.85%), Query Frame = -3 Query: 181 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSD 669 I++A+FPG+QGGP H I+ AVA + PE+ YQ++++ N+ +++L E+G+ +VSGGT+NHL+LV++R+KG+ G E +L+ V I NKNT+P D S MV GIR+GTPA+TSRG +K+A AA+ +AL + K +D VA L ++ Sbjct: 250 IDKAIFPGIQGGPLMHVIAAKAVAFGEALKPEFVEYQKRIVENAKVLSETLAEKGFRIVSGGTDNHLMLVDVRSKGLTGKEAEYILDEVGITVNKNTIPYDPASPMVTSGIRIGTPAVTSRGMDTLAMKKIA----AAIDIALSEPNEAGAAKARDMVAALCAE 409
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_DESHD (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 71/164 (43.29%), Postives = 108/164 (65.85%), Query Frame = -3 Query: 181 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSD 669 I++A+FPG+QGGP H I+ AVA + PE+ YQ++++ N+ +++L E+G+ +VSGGT+NHL+LV++R+KG+ G E +L+ V I NKNT+P D S MV GIR+GTPA+TSRG +K+A AA+ +AL + K +D VA L ++ Sbjct: 250 IDKAIFPGIQGGPLMHVIAAKAVAFGEALKPEFVEYQKRIVENAKVLSETLAEKGFRIVSGGTDNHLMLVDVRSKGLTGKEAEYILDEVGITVNKNTIPYDPASPMVTSGIRIGTPAVTSRGMDTLAMKKIA----AAIDIALSEPNEAGAAKARDMVAALCAE 409
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33 Identity = 75/192 (39.06%), Postives = 112/192 (58.33%), Query Frame = -3 Query: 97 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVGFEK 669 +++AVFPGLQGGPHNHT + +AVAL + PE++ Y +++N++ A+ LL RG+DLVSGGT+NHL+LV+L +KG+ G V + L+ I N NTVP D P GIR+GTPA+TSRG + ++A + + KGD +E++ + + +V K FPT G ++ Sbjct: 253 LDKAVFPGLQGGPHNHTTAAIAVALLEAMQPEFRDYARNIVANAAVLAEELLARGFDLVSGGTDNHLILVDLTSKGVAGKPVARALDRAGIELNYNTVPFDPRKPFDPSGIRLGTPAVTSRGMGPAEMRQIAAWIDEVTTAV--AKGD---------------EEALAAVEQRVAGEVRELTKNFPTPGLDR 427
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPL (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Lens) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32 Identity = 76/190 (40.00%), Postives = 109/190 (57.37%), Query Frame = -3 Query: 115 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 681 ++ K+N AVFPG+QGGP H I+ AVA + PE+K YQ+QVL+N+ L RGYD+VSGGT+NHL+LV+L NKGI G + L +I NKN+VP D S V G+R+GTPA T+RGF E + T L ++VA ++ + ++ IS ++ +V + + FP Sbjct: 248 IEKKLNSAVFPGMQGGPLMHVIAAKAVAFAEALLPEFKTYQQQVLANARTMCSVLQSRGYDIVSGGTDNHLLLVDLINKGITGKEADAALGRANITVNKNSVPNDPRSPFVTSGLRLGTPAATTRGFKEREI-----------------------TLLSNWVADVLDNVHDETNISRVKTQVLLLCREFP 414
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_ALKMQ (Serine hydroxymethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32 Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = -3 Query: 256 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAV 669 I++A+FPGLQGGP H I+ AVA K+ P +KAYQEQV+ N+ + L ++G+DLVS GT+ HL+L++LRNK I G E++ + V I NKNT+P D S V GIR+GTPA+T+RG EE+ +K+A N + Sbjct: 248 IDKAIFPGLQGGPLMHVIAAKAVAFKEALEPGFKAYQEQVIKNAKALGEELKKQGFDLVSDGTDTHLLLIDLRNKNITGKDAERLFDEVGITVNKNTIPFDPQSPFVTSGIRIGTPAVTTRGMKEEEMKKIAGVMNIII 386
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_VEREI (Serine hydroxymethyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=glyA PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32 Identity = 77/189 (40.74%), Postives = 105/189 (55.56%), Query Frame = -3 Query: 106 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 669 I+ A+FPGLQGGP H I+ AVA ++ P ++ YQEQVL N+ AQ+L RG +VSGGT++H++LV+LR KGI G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF EE AE +A L+ + I+ +R KV+ RFP G Sbjct: 249 IHSAIFPGLQGGPLMHVIAAKAVAFQEALQPGFRLYQEQVLKNAKVLAQTLAARGLRIVSGGTQSHMMLVDLRAKGITGKEAEAVLGAAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKEEQARSTAE-----------------------LIADLLDKPRDAANIAAVRAKVDALTARFPVYG 414
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_VARPS (Serine hydroxymethyltransferase OS=Variovorax paradoxus (strain S110) GN=glyA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32 Identity = 77/186 (41.40%), Postives = 106/186 (56.99%), Query Frame = -3 Query: 115 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 669 IN A+FPGLQGGP H I+ AVA K+ +PE+KAYQ+QV+ N+ A +L ERG +VSG TE+H++LV+LR KGI G E VL S H+ NKN +P D MV G+R+GTPA+T+RGF +E+ A + +A ++ + + I +R KV RFP Sbjct: 249 INSAIFPGLQGGPLMHVIAAKAVAFKEAMSPEFKAYQQQVVKNAQIVADTLTERGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFRDEEARITA-----------------------NLIADVLENPRDAANIDAVRAKVHALTSRFP 411
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_RICAH (Serine hydroxymethyltransferase OS=Rickettsia akari (strain Hartford) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.887e-32 Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 280 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKV 672 KIN A+FPGLQGGP H ++ AVA + PEYK+Y +Q++SN+ A SL ERGYD+++GGT+NH+VLV+LR GI G L++ I NKN +P D S + GIR+GTPA T+RGF E+DF V Sbjct: 250 KINSALFPGLQGGPLMHIVAAKAVAFLESLQPEYKSYIKQIISNAKALASSLQERGYDILTGGTDNHIVLVDLRKNGITGKLAANSLDNAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEQDFVSV 381
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_GLUOX (Serine hydroxymethyltransferase OS=Gluconobacter oxydans GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.887e-32 Identity = 72/187 (38.50%), Postives = 111/187 (59.36%), Query Frame = -3 Query: 115 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 672 K+N AVFPGLQGGP H I+G AVA + + E+KAYQ++VL+N+ A L RG+D+V+GGT++HL+LV+LR K + G E +LE I ANKN +P D V GIR+G+PA T+RGF E +F +V G + + + + +++ ++ + + ++V+ +RFP Sbjct: 260 KVNSAVFPGLQGGPLMHVIAGKAVAFGEALSDEFKAYQKRVLANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKNAIPFDPEKPFVTSGIRLGSPAATARGFGEAEFREV-------------------GRMIDEVLTAALEEDNAEAVTARVHEEVKALCRRFP 427 The following BLAST results are available for this feature:
BLAST of CN184817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184817 ID=CN184817; Name=CN184817; organism=Citrus sinensis; type=EST; length=734bpback to top |