CN184817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 64/140 (45.71%), Postives = 97/140 (69.29%), Query Frame = -3 Query: 253 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVK 669 +++A+FPG+QGGP HTI+ AV + +YK Y +QV+ N+ + L G+ L+SGGT+NHL+L++L NK I G EK+L+SV I NKNT+P + +S + GIR+GTPA+T+RGF EE+ +K+A F N +++ Sbjct: 248 VDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBH (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 64/140 (45.71%), Postives = 97/140 (69.29%), Query Frame = -3 Query: 253 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVK 669 +++A+FPG+QGGP HTI+ AV + +YK Y +QV+ N+ + L G+ L+SGGT+NHL+L++L NK I G EK+L+SV I NKNT+P + +S + GIR+GTPA+T+RGF EE+ +K+A F N +++ Sbjct: 248 VDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 64/140 (45.71%), Postives = 97/140 (69.29%), Query Frame = -3 Query: 253 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVK 669 +++A+FPG+QGGP HTI+ AV + +YK Y +QV+ N+ + L G+ L+SGGT+NHL+L++L NK I G EK+L+SV I NKNT+P + +S + GIR+GTPA+T+RGF EE+ +K+A F N +++ Sbjct: 248 VDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB1 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 64/140 (45.71%), Postives = 97/140 (69.29%), Query Frame = -3 Query: 253 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVK 669 +++A+FPG+QGGP HTI+ AV + +YK Y +QV+ N+ + L G+ L+SGGT+NHL+L++L NK I G EK+L+SV I NKNT+P + +S + GIR+GTPA+T+RGF EE+ +K+A F N +++ Sbjct: 248 VDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_ACIRA (Serine hydroxymethyltransferase OS=Acinetobacter radioresistens GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 73/190 (38.42%), Postives = 109/190 (57.37%), Query Frame = -3 Query: 115 MKTKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFP 681 ++ K+ AVFPG QGGP H ++ A+ K+ PEYKAYQ+QV+ N+ A+ L+ERGYD+VSGGT+NHL L++L + I G + L + HI NKN+VP D S V GIR+GTPA+T+RGF G+ + L ++A ++ + ++ I+ ++ KVE +FP Sbjct: 247 IEKKLQSAVFPGNQGGPLVHAVAAKAICFKEAMAPEYKAYQQQVVKNAQAMAEVLIERGYDVVSGGTKNHLFLLSLIKQDITGKDADAWLGAAHITVNKNSVPNDPRSPFVTSGIRIGTPAVTTRGF-----------------------GEAEVRDLASWIADILDSKGDEAVINTVKAKVEAVCAKFP 413
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_XANCP (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32 Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = -3 Query: 106 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 672 K+ VFPG+QGGP H I+ AVA K+ PE+K YQ+QV+ N+ A +L+ RGY +VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D L +++A ++ + + ++ +RD V K++P G Sbjct: 251 KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDC-----------------------VDLANWIADVLDAPADDAVLAKVRDAVTAQCKKYPVYG 417
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_XANCB (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32 Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = -3 Query: 106 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 672 K+ VFPG+QGGP H I+ AVA K+ PE+K YQ+QV+ N+ A +L+ RGY +VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D L +++A ++ + + ++ +RD V K++P G Sbjct: 251 KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDC-----------------------VDLANWIADVLDAPADDAVLAKVRDAVTAQCKKYPVYG 417
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_XANC8 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32 Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = -3 Query: 106 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEVYAKRFPTVG 672 K+ VFPG+QGGP H I+ AVA K+ PE+K YQ+QV+ N+ A +L+ RGY +VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D L +++A ++ + + ++ +RD V K++P G Sbjct: 251 KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDC-----------------------VDLANWIADVLDAPADDAVLAKVRDAVTAQCKKYPVYG 417
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32 Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = -3 Query: 217 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGT 669 +++ +FPG+QGGP H I+ AV K+ T E+K YQ+QV+ N+ K A+ +RGY +VSGGT+ HL LV+L K I G EK LES I NKNT+P + S V GIR+GTPA+T+RG EE+ E++AE + L L D GT Sbjct: 248 VDKTIFPGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEM----IDLVLSNVTDENGT 395
BLAST of CN184817 vs. ExPASy Swiss-Prot
Match: GLYA_STACT (Serine hydroxymethyltransferase OS=Staphylococcus carnosus (strain TM300) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.170e-32 Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = -3 Query: 184 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFNAAVKLALKIKGDTKGTKLKDFVATLMS 672 +I++ +FPG+QGGP H I+ AVA + P++K YQEQV+ N+ A +L+E G+ +VSGGT+NHLV V+++ GI G E+ L+ V I NKNT+P D V G+R+GTPA T+RGF E DFE+VA+ + V+ K + K + D VA L S Sbjct: 245 QIDKTIFPGIQGGPLEHVIAAKAVAFGEALNPDFKDYQEQVVKNAKALADTLIEEGFRVVSGGTDNHLVAVDVKGSFGITGKEAEEALDEVGITCNKNTIPFDQEKPFVTSGLRLGTPAATTRGFEEADFEEVAKIISLVVQ---NPKDEAKLKEASDRVAALTS 406 The following BLAST results are available for this feature:
BLAST of CN184817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184817 ID=CN184817; Name=CN184817; organism=Citrus sinensis; type=EST; length=734bpback to top |