CN184798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM4_BOVIN (Secretory carrier-associated membrane protein 4 OS=Bos taurus GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 36/97 (37.11%), Postives = 49/97 (50.52%), Query Frame = 1 Query: 406 PFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFY 696 P P + + S EIPI Q L + W L N++A + WI GG F LA ++ LL P YV W+RP Y+A R+DS+ F FF + Sbjct: 16 PLKPCFYQNFSDEIPIEHQVLVKRIYRLWLFYCATLGVNLVACLAWWIAGGSGANFGLALLWLLLFSPCGYVCWFRPAYKAFRSDSSFNFMAFFFIF 112
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM2_HUMAN (Secretory carrier-associated membrane protein 2 OS=Homo sapiens GN=SCAMP2 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 55/223 (24.66%), Postives = 94/223 (42.15%), Query Frame = 1 Query: 121 DPNPFDEEEVNPFSNGPAAPASR----SQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERE--LASWEADLXXXXXXXXXXXXAIVK---------AGVPTDDRNWPPF------FPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVK--IFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 D NPF + V +N P + S+ + T+ P+ Q G++ L EP + + +++ +A L + + A + NWPP P + D S EIP QR+ + + W + L N++A + W G K F L+ ++ L+ P +++ WYRP+Y+A R+D++ F FF + IG I Sbjct: 14 DVNPFQDPSVTQLTNAPQGGLAEFNPFSETNAATTVPVT--QLPGSSQPAVLQPSVEPTQPTPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNTVANLHVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLA-WFSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYI 233
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM2_MOUSE (Secretory carrier-associated membrane protein 2 OS=Mus musculus GN=Scamp2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 55/208 (26.44%), Postives = 82/208 (39.42%), Query Frame = 1 Query: 127 NPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIP-----LDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPF------FPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVK--IFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIG 711 NPF E N + PA A P+V + Q V L E +K EL E +L A + D NWPP P + D S EIP QR+ + + W + L N++A + W F L+ ++ L+ P +++ WYRP+Y+A R+D++ F FF + IG Sbjct: 38 NPFSE--TNAATTVPATQAPGPSQPAVLQPSVEPAQPTPQAVAAAAQAGLLRQQEELDRKAAELERKERELQN------------TAANLHVRDNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLA-WFTSDAANGTAFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIG 230 The following BLAST results are available for this feature:
BLAST of CN184798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184798 ID=CN184798; Name=CN184798; organism=Citrus sinensis; type=EST; length=722bpback to top |