CN184796

Overview
NameCN184796
Unique NameCN184796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_VIBVY (Adenine phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=apt PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 82/160 (51.25%), Postives = 116/160 (72.50%), Query Frame = 1
Query:  244 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            IA I ++I+ IPD+PKPGI+F+D+T+LL D +A++ TI L V++YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++ Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:    6 IAQIQASIKSIPDYPKPGILFRDVTSLLEDAQAYQATIQLLVDKYKDMGFTKVVGTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_VIBVU (Adenine phosphoribosyltransferase OS=Vibrio vulnificus GN=apt PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 82/160 (51.25%), Postives = 116/160 (72.50%), Query Frame = 1
Query:  244 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            IA I ++I+ IPD+PKPGI+F+D+T+LL D +A++ TI L V++YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++ Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:    6 IAQIQASIKSIPDYPKPGILFRDVTSLLEDAQAYQATIQLLVDKYKDMGFTKVVGTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_VIBPA (Adenine phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=apt PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 84/160 (52.50%), Postives = 115/160 (71.88%), Query Frame = 1
Query:  244 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I+ I S+I+ I D+PKPGI+F+D+T+LL D KA++ TI L VERYKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++ Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:    6 ISLIKSSIKSIQDYPKPGILFRDVTSLLEDAKAYQATIGLLVERYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQSYELEYGIDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_ACTPJ (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=apt PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 88/168 (52.38%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL--FVLV 750
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+ Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+ERL ++ +  F LV
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERLEKEGINSFTLV 174          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_ACTP7 (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=apt PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 88/168 (52.38%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL--FVLV 750
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+ Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+ERL ++ +  F LV
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERLEKEGINSFTLV 174          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_ACTP2 (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=apt PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43
Identity = 88/168 (52.38%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL--FVLV 750
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+ Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+ERL ++ +  F LV
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERLEKEGINSFTLV 174          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_VIBHB (Adenine phosphoribosyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=apt PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43
Identity = 83/160 (51.88%), Postives = 116/160 (72.50%), Query Frame = 1
Query:  244 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I+ I S+I+ I D+PKPGI+F+D+T+LL D KA++ TI+L V+RYKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++ Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G +RL
Sbjct:    6 ISLIRSSIKSIQDYPKPGILFRDVTSLLEDAKAYQATINLLVDRYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_PHOLL (Adenine phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=apt PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.722e-43
Identity = 83/157 (52.87%), Postives = 114/157 (72.61%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I  +I  IPD+PKPG++F+DITTLL +  A++ TIDL VERY+ K I+ + G EARGF+FG P+AL +G  F+P+RK  KLP E +SE Y+LEYG D +EMH  +V+  ++ L++DDL+ATGGT+ A +RL+ R+G  V E A +I L  L G ERL
Sbjct:   11 IKDSIETIPDYPKPGVLFRDITTLLDNPLAYQATIDLLVERYQGKGITKIVGTEARGFLFGAPVALRLGVGFIPVRKAGKLPRETLSETYNLEYGTDTLEMHKDSVRENDKVLVIDDLLATGGTVEATVRLIRRLGGEVSEAAFIIGLLGLGGVERL 167          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_NITEC (Adenine phosphoribosyltransferase OS=Nitrosomonas eutropha (strain C91) GN=apt PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.722e-43
Identity = 88/169 (52.07%), Postives = 117/169 (69.23%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK--PLFVLVS 753
            I S IR IP +P+ GIMF+DITTLL D    R TID   ERY+ + I  V GIE+RGFIF  P+A A+GA FVP+RK  KLP E IS +Y LEYG D +E+H  A+   +R L++DDL+ATGGT+ AAI+L++ +G  ++EC  VI+LP + G  RL ++  PL+ L S
Sbjct:    3 IKSRIRTIPHYPREGIMFRDITTLLKDPVGLRITIDEIAERYRAEKIDKVVGIESRGFIFAAPVAYALGAGFVPIRKQGKLPAETISCDYQLEYGYDKIEIHADAIDKDDRVLMIDDLIATGGTMEAAIKLVQEMGGKIIECCFVIDLPGVGGSTRLRQQDHPLYSLCS 171          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_SHEFN (Adenine phosphoribosyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=apt PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.270e-42
Identity = 80/160 (50.00%), Postives = 115/160 (71.88%), Query Frame = 1
Query:  244 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            +A I  +I+ IPD+P PGIMF+D+T+LL + +A++ TI + V  Y+ K  + V G EARGF+FG P+AL +G  FVP+RKP KLP + IS+ Y LEYGKD +E+HV A+ A ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LPE+ G +RL
Sbjct:    7 LALIKQSIKTIPDYPIPGIMFRDVTSLLENAEAYKATIAILVAHYQSKGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRKTISQTYDLEYGKDTLEIHVDAINANDKVLVIDDLLATGGTIEATVKLIRELGGEVSHAAFVISLPEIGGEKRL 166          
The following BLAST results are available for this feature:
BLAST of CN184796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_VIBVY5.700e-4351.25Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_VIBVU5.700e-4351.25Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_VIBPA5.700e-4352.50Adenine phosphoribosyltransferase OS=Vibrio paraha... [more]
APT_ACTPJ5.700e-4352.38Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_ACTP75.700e-4352.38Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_ACTP25.700e-4352.38Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_VIBHB7.444e-4351.88Adenine phosphoribosyltransferase OS=Vibrio harvey... [more]
APT_PHOLL9.722e-4352.87Adenine phosphoribosyltransferase OS=Photorhabdus ... [more]
APT_NITEC9.722e-4352.07Adenine phosphoribosyltransferase OS=Nitrosomonas ... [more]
APT_SHEFN1.270e-4250.00Adenine phosphoribosyltransferase OS=Shewanella fr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184796 ID=CN184796; Name=CN184796; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAGGCGTGATGCATGCTGCAGCTTCACTTCTTAACTCTTCAAACCT
CTCCCTTCGCTTTGCATCTCAAACGCAGACACGACTCTCTCCCTGGATCG
CCGCTCCCTCCTCTGTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGA
ATTGCACTCCCTCCTCTGCATTCCACCGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGG
AGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGAC
GATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGA
GCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAG
AGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTA
AGCTAAACTTGAC
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