CN184796

Overview
NameCN184796
Unique NameCN184796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_PASMU (Adenine phosphoribosyltransferase OS=Pasteurella multocida GN=apt PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.270e-42
Identity = 85/161 (52.80%), Postives = 118/161 (73.29%), Query Frame = 1
Query:  241 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            ++A I S+I+ IP+ PK GI+F+DIT+LL    AF+  +DLFV RYK+K I+ V G E+RGFIFG P+ALA+   FV +RKP KLP E IS+ Y LEYG+D +E+H  A+ A ++ LI+DDL+ATGGT+ A ++L++R+G  V + A VI LP+L G  RL
Sbjct:    4 KLALIKSSIKSIPNHPKEGIIFRDITSLLEVPAAFQTVVDLFVTRYKEKGITKVLGTESRGFIFGAPVALALNVPFVLVRKPGKLPRETISQTYQLEYGQDTLEIHTDAIHAQDKVLIIDDLLATGGTVEATVKLVQRLGGDVQDAAFVINLPDLGGEARL 164          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_BORPD (Adenine phosphoribosyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=apt PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.270e-42
Identity = 85/169 (50.30%), Postives = 119/169 (70.41%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLVS 753
            I   IR +PD+P+PG++F+DIT LL D + FR  IDLFV RY  + + +VAG++ARGFI G  +A  +   FVP+RK  KLP   ++E Y+LEYG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LPEL G  ++     PLF + S
Sbjct:    9 IRRTIRSVPDWPRPGVVFRDITPLLQDPRTFRVLIDLFVYRYMRQRLDLVAGVDARGFIIGSVLAYELNLGFVPVRKQGKLPYRTVAESYTLEYGNSSVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPELGGSGKVAATGTPLFTVCS 177          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_RALEH (Adenine phosphoribosyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=apt PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.658e-42
Identity = 88/183 (48.09%), Postives = 122/183 (66.67%), Query Frame = 1
Query:  217 ADVKAQDPRIAGISS----AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL--GEKPLFVL 747
            AD   Q P +  ++      IR +PD+P PG+MF+DIT LL + K  R  ID+FV RY D  + +VAGI+ARGFI G  +A  +   FVP+RK  KLP + ++EEY LEYG   +E+H  A ++G+R L+VDDL+ATGGT+ A ++LLER+G  VVE A +++LPEL G + L  G  PLF +
Sbjct:    2 ADSIIQSPELGDVTGYLRERIRTVPDWPMPGVMFRDITPLLQNPKTLRVLIDVFVHRYMDAQLDLVAGIDARGFILGAIVAYELNLGFVPIRKKGKLPFQTVAEEYELEYGSATVEIHADACKSGDRVLLVDDLIATGGTMMAGLKLLERLGATVVEGAAIVDLPELGGSKLLQDGGLPLFTV 184          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_NITEU (Adenine phosphoribosyltransferase OS=Nitrosomonas europaea GN=apt PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.658e-42
Identity = 84/160 (52.50%), Postives = 111/160 (69.38%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 732
            I S IR IP +P  GIMF+DITTLL D    R TID  V+RY+ + I  V GIE+RGFI   P+A A+ A FVP+RK  KLP E I  +Y LEYG D +E+HV A+  G+R L++DDL+ATGGT+ AAI+L++  G  V+EC  VI+LP++ G  RL ++
Sbjct:    3 IKSRIRTIPHYPHEGIMFRDITTLLKDPAGLRSTIDGIVQRYQTEKIDKVVGIESRGFIIAAPVAYALSAGFVPVRKQGKLPAETIGCDYQLEYGYDKVEIHVDAIDKGDRVLLIDDLIATGGTMEAAIKLVQEAGGEVIECCFVIDLPDIGGSRRLRQQ 162          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_LEPBA (Adenine phosphoribosyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=apt PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.658e-42
Identity = 80/157 (50.96%), Postives = 117/157 (74.52%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            + S IR IPD+PKPGI+F+DIT+LL+D + F+ TI +FVERY++  ++ +A I+ARGFI G  +A  +G  FVP+RK  KLPG  ISE Y+LEYG D +E+H  A+  G++ LI+DDL+ATGGTL A+I+L++ +   + EC+ +I LP+L G +R+
Sbjct:    4 VKSKIRTIPDYPKPGILFRDITSLLIDPEGFQLTIGMFVERYQNAKLNKIAAIDARGFIPGAALAFQLGVGFVPIRKKGKLPGNTISESYALEYGVDHVEIHTDAIVPGDKVLIMDDLIATGGTLEASIKLIQNLKGQIHECSTIINLPDLGGAKRI 160          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_DESOH (Adenine phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=apt PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.166e-42
Identity = 81/166 (48.80%), Postives = 118/166 (71.08%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            + + IR +P++P  G+MF+DITTLL D  AF++ I+ F +RY+   I  + GI+ARG IFG P+A  +   FVP+RK  K+P   I   YSLEYG+ ++E+H  A+  GER ++VDDL+ATGGT+ A I L+E++G  VVECA VI+LP+LKGRE++ +  +F L+
Sbjct:    3 LKATIRTLPNWPIEGVMFRDITTLLQDPAAFKEAINRFYDRYRTMKIDKIVGIDARGLIFGAPLAYKLEVGFVPVRKKGKIPFRTIGAAYSLEYGESMVEIHEDAILKGERVVVVDDLIATGGTVKATIDLVEKLGGEVVECAFVIDLPDLKGREKIRDYKMFALM 168          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_CHLAA (Adenine phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=apt PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.166e-42
Identity = 88/166 (53.01%), Postives = 114/166 (68.67%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            ++S IR IPDFP PGI F+DITTL+ + +AF + ID   ERY+++ I  V GIE+RGFIF  P+A  +G   VP+RKP KLP      EY LEYG + +E+H  A Q G R L++DDL+ATGGT++AA  L+E  G  V E A VIEL  L GRERL E+P+F L+
Sbjct:    6 LASLIRNIPDFPIPGIQFKDITTLIGNGQAFSEVIDRLHERYQNQQIDAVVGIESRGFIFSAPLAYRLGVGLVPIRKPGKLPAATYQIEYQLEYGTNRLEIHRDAFQPGARVLVIDDLLATGGTIAAACDLIEMAGGQVAELAFVIELTFLNGRERLRERPVFSLI 171          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_PECCP (Adenine phosphoribosyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42
Identity = 79/157 (50.32%), Postives = 114/157 (72.61%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I ++I+ IPD+PKPGI+F+D+T+LL D  A+  +I++   RY++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   ISE Y LEYG D +E+H  A+ AG+  L++DDL+ATGGTL A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   13 IKNSIKSIPDYPKPGILFRDVTSLLEDPVAYAASIEMLANRYRNSGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRPTISESYELEYGSDTLEIHSDAISAGDNVLVIDDLLATGGTLEATVKLIRRLGGTVNDAAFIINLFDLGGEQRL 169          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_METFK (Adenine phosphoribosyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I S IR IPD+PKPGI F+DITTLL D    R  +D  VERY    +  V GIE+RGFI G  +A  +G  FVP+RK  KLPG+V+  +Y+LEYG D +E+H  A+   E  L++DDL+ATGGT  AA  L+E++G HV+ECA +I LP+L G  +L
Sbjct:    3 IKSLIRTIPDYPKPGIQFRDITTLLKDASGLRQVVDALVERYAGAKVDKVVGIESRGFIVGAAVAYELGVGFVPVRKKGKLPGDVLGHDYALEYGTDRVEIHSDAISPDEHVLLLDDLIATGGTAEAAAILIEKLGGHVLECAFIIGLPDLGGERKL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_ERWT9 (Adenine phosphoribosyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42
Identity = 80/157 (50.96%), Postives = 114/157 (72.61%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            + ++I+ IPD+PKPGI+F+D+T+LL D KA+  +I+L VERY+   I+ V G EARGF+FG P+AL +G  FVP+RKP KLP +  +E+Y+LEYG D +E+H  A+Q G+  L+VDDL+ATGGT+ A + L+ R G  V + A +I L +L G  RL
Sbjct:   11 LKNSIQSIPDYPKPGILFRDVTSLLEDPKAYALSIELLVERYRHAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRKTFAEDYALEYGTDTLELHCDAIQPGDVVLVVDDLLATGGTIEATVNLIRRAGGSVKDAAFIINLFDLSGEARL 167          
The following BLAST results are available for this feature:
BLAST of CN184796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PASMU1.270e-4252.80Adenine phosphoribosyltransferase OS=Pasteurella m... [more]
APT_BORPD1.270e-4250.30Adenine phosphoribosyltransferase OS=Bordetella pe... [more]
APT_RALEH1.658e-4248.09Adenine phosphoribosyltransferase OS=Ralstonia eut... [more]
APT_NITEU1.658e-4252.50Adenine phosphoribosyltransferase OS=Nitrosomonas ... [more]
APT_LEPBA1.658e-4250.96Adenine phosphoribosyltransferase OS=Leptospira bi... [more]
APT_DESOH2.166e-4248.80Adenine phosphoribosyltransferase OS=Desulfococcus... [more]
APT_CHLAA2.166e-4253.01Adenine phosphoribosyltransferase OS=Chloroflexus ... [more]
APT_PECCP2.829e-4250.32Adenine phosphoribosyltransferase OS=Pectobacteriu... [more]
APT_METFK2.829e-4252.23Adenine phosphoribosyltransferase OS=Methylobacill... [more]
APT_ERWT92.829e-4250.96Adenine phosphoribosyltransferase OS=Erwinia tasma... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184796 ID=CN184796; Name=CN184796; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAGGCGTGATGCATGCTGCAGCTTCACTTCTTAACTCTTCAAACCT
CTCCCTTCGCTTTGCATCTCAAACGCAGACACGACTCTCTCCCTGGATCG
CCGCTCCCTCCTCTGTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGA
ATTGCACTCCCTCCTCTGCATTCCACCGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGG
AGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGAC
GATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGA
GCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAG
AGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTA
AGCTAAACTTGAC
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