CN184796

Overview
NameCN184796
Unique NameCN184796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STRE4 (Adenine phosphoribosyltransferase OS=Streptococcus equi subsp. equi (strain 4047) GN=apt PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 78/166 (46.99%), Postives = 108/166 (65.06%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            ++  I  I ++PK GI F+DI+ L+   KA+   I   V+   DK+I ++ G EARGFI G P+A+ +G  F P+RKP KLP EVIS  Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I L+E++G  V  CA +IEL  L GR+ +G+    VL+
Sbjct:    3 LTQYIASIENYPKEGITFRDISPLMASGKAYSYAIREIVQYACDKDIDMIVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPREVISASYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIDLVEKLGGIVAGCAFLIELDGLNGRQAIGDYDCKVLM 168          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STAS1 (Adenine phosphoribosyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=apt PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 75/160 (46.88%), Postives = 110/160 (68.75%), Query Frame = 1
Query:  274 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 753
            + D+PKPG+ F+DITT++ + +A+    D  VE  K +++ ++ G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E++ +  +  L+S
Sbjct:   10 VEDWPKPGVNFKDITTIMDNGEAYGYATDQIVEYAKLRDVDIIVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLIS 169          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_LACSS (Adenine phosphoribosyltransferase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=apt PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  274 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            +PDFP+ G+ F+DI+ L+ D +A+    D  VE  K+K + ++ G EARGFI G P+A  +G  F P RK  KLP E +S  Y LEYGK  + MH  AV+ G++ L+ DDL+ATGGT++A I+++E +G  VV  A  IEL +L GRE++ +  +F L+
Sbjct:   12 VPDFPEAGVTFRDISPLMSDGEAYAAATDKIVEYAKNKGVEMIVGPEARGFIVGCPVAYKLGVGFAPARKKGKLPRETVSASYGLEYGKSTLYMHKDAVKPGQKVLVTDDLLATGGTIAATIKMVEELGGIVVGTAFFIELKDLNGREKIKDYDIFKLM 170          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_HUMAN (Adenine phosphoribosyltransferase OS=Homo sapiens GN=APRT PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 76/175 (43.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query:  235 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            D  +  +   IR  PDFP PG++F+DI+ +L D  +FR  I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +   YSLEYGK  +E+   A++ G+R ++VDDL+ATGGT++AA  LL R+   V+EC  ++EL  LKGRE+L   P F L+
Sbjct:    3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLL 177          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_DESAD (Adenine phosphoribosyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=apt PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 77/153 (50.33%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            IR IPDFPK GI++ DIT LL + KAF+ TID   ER+ D  I  +A  EARGFIFG P+A  +   FVP+RKP KLP E IS  Y LEYG D + MHV AV   E  L++DD++ATGGT    ++L+E+ G  V     + EL  L G+ +L
Sbjct:    7 IRDIPDFPKEGIVYFDITPLLAEPKAFQYTIDQLAERFADYKIDKIAAAEARGFIFGAPLATKLDIGFVPIRKPGKLPYETISVSYDLEYGTDNLSMHVDAVAKDENVLLIDDVLATGGTAEGMVKLVEKAGGKVSGMGFIAELTFLDGKSKL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT2_METMP (Adenine phosphoribosyltransferase 2 OS=Methanococcus maripaludis GN=apt2 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 73/153 (47.71%), Postives = 103/153 (67.32%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            IR++ +FP  GI F+D+T +L D KA + T     +  +DKN+ VV G EARGF+FG P+A  +   FVP+RKP KLP +  S +Y+LEYG D +E+H   ++ G+   IVDDL+ATGGT+    +L+E++G HV     VIEL ELKGR++L
Sbjct:    7 IRIVENFPIEGISFKDVTPILKDPKAMKHTTKEIAKYLEDKNVDVVVGPEARGFLFGVPVAHELDIGFVPVRKPGKLPYKTFSVDYALEYGSDSLEIHSDGIEKGQNVAIVDDLLATGGTVLGVSKLVEKLGGHVSALNFVIELTELKGRDKL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_TREDE (Adenine phosphoribosyltransferase OS=Treponema denticola GN=apt PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.564e-35
Identity = 78/166 (46.99%), Postives = 105/166 (63.25%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            I +AIR +PDFPK GI+F DIT +L++ + F   +D   E YKDK +  VA IEARGFIF  P A  +G   + +RK  KLPGE  S  Y LEYG+  +E+H   V  G++ L++DDL+ATGGTL+AA  +LE  G  VV    V+ LP L   + LG+ P+  L+
Sbjct:   18 IDAAIRRVPDFPKKGILFYDITGILVNPEVFSYCLDKMTEMYKDKKVDAVAAIEARGFIFAAPFAYKMGIPLILIRKKGKLPGETYSASYDLEYGQASVEVHKTDVVKGQKVLLLDDLIATGGTLNAARSILEEGGAKVVGFCGVVGLPFLNYSKVLGDLPVKTLI 183          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_THESQ (Adenine phosphoribosyltransferase OS=Thermotoga sp. (strain RQ2) GN=apt PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.349e-35
Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            IR IPDFP+ GI+F+DIT LL + +AF++ ID   E   DK   +V   EARGFI G  +A  +G  FVP+RKP KLP + + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+RL
Sbjct:    7 IRDIPDFPQKGIVFRDITPLLRNQEAFKEAIDRMCELVFDKEFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYKTVYEEYQLEYGTEQLHIHEDAIEKGQKVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_THENN (Adenine phosphoribosyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=apt PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.349e-35
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            IR IPDFP+ GI+F+DIT LL D++AFR+ ID   +   D++  +V   EARGFI G  +A  +G  FVP+RKP KLP   + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  V   A ++EL  L  R+RL
Sbjct:    7 IRDIPDFPQKGIIFRDITPLLKDSRAFREAIDRMCDLVSDRDFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYRTVYEEYQLEYGTEQLHIHEDAIERGQKVLIVDDVLATGGTAEALIRLVKKLGGEVSALAFLVELSYLNPRKRL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_CAMC5 (Adenine phosphoribosyltransferase OS=Campylobacter curvus (strain 525.92) GN=apt PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.349e-35
Identity = 76/153 (49.67%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  259 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGE--RALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 711
            ++IR I DFPKPGI+F+DITTLL D +AF   +D    RY++  I  +AGIE+RGFIFG  +A  +   FVP+RKPKKLP   IS++YSLEYG D +++H+ A    E  R L++DDL+ATGGT  A++ L+++     VE   +I+L EL G
Sbjct:   14 NSIRAIKDFPKPGIVFRDITTLLNDKEAFNFLMDHLTARYENFGIDFIAGIESRGFIFGAALAARLRLPFVPIRKPKKLPYITISQKYSLEYGVDEVQIHIDAFGEKEDARVLLIDDLIATGGTAKASVELIDQTKAKCVEACFLIDLKELGG 166          
The following BLAST results are available for this feature:
BLAST of CN184796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_STRE41.964e-3546.99Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STAS11.964e-3546.88Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_LACSS1.964e-3545.28Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_HUMAN1.964e-3543.43Adenine phosphoribosyltransferase OS=Homo sapiens ... [more]
APT_DESAD1.964e-3550.33Adenine phosphoribosyltransferase OS=Desulfovibrio... [more]
APT2_METMP1.964e-3547.71Adenine phosphoribosyltransferase 2 OS=Methanococc... [more]
APT_TREDE2.564e-3546.99Adenine phosphoribosyltransferase OS=Treponema den... [more]
APT_THESQ3.349e-3549.02Adenine phosphoribosyltransferase OS=Thermotoga sp... [more]
APT_THENN3.349e-3548.37Adenine phosphoribosyltransferase OS=Thermotoga ne... [more]
APT_CAMC53.349e-3549.67Adenine phosphoribosyltransferase OS=Campylobacter... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006B23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184796 ID=CN184796; Name=CN184796; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAGGCGTGATGCATGCTGCAGCTTCACTTCTTAACTCTTCAAACCT
CTCCCTTCGCTTTGCATCTCAAACGCAGACACGACTCTCTCCCTGGATCG
CCGCTCCCTCCTCTGTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGA
ATTGCACTCCCTCCTCTGCATTCCACCGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGG
AGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGAC
GATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGA
GCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAG
AGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTA
AGCTAAACTTGAC
back to top