CN184796

Overview
NameCN184796
Unique NameCN184796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_XANOR (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 78/167 (46.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query:  256 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 753
            S  IR I DFPKPGI+F+DIT LL D   F   +D   + ++   +  V GIEA GFI G  +A  +   FVP+RKP KLPG  +  EY+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:   19 SERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEALGFILGAALARELRTGFVPVRKPGKLPGRTLIREYALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_XANOP (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 78/167 (46.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query:  256 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 753
            S  IR I DFPKPGI+F+DIT LL D   F   +D   + ++   +  V GIEA GFI G  +A  +   FVP+RKP KLPG  +  EY+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:   19 SERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEALGFILGAALARELRTGFVPVRKPGKLPGRTLIREYALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_XANOM (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 78/167 (46.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query:  256 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 753
            S  IR I DFPKPGI+F+DIT LL D   F   +D   + ++   +  V GIEA GFI G  +A  +   FVP+RKP KLPG  +  EY+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:   19 SERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEALGFILGAALARELRTGFVPVRKPGKLPGRTLIREYALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STRTD (Adenine phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I  I ++PK G+ F+DI+ L+ D  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP +VIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GRE +
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPRKVISVDYEKEYGVDTLCMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAI 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STRT2 (Adenine phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I  I ++PK G+ F+DI+ L+ D  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP +VIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GRE +
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPRKVISVDYEKEYGVDTLCMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAI 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_STRT1 (Adenine phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I  I ++PK G+ F+DI+ L+ D  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP +VIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GRE +
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPRKVISVDYEKEYGVDTLCMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAI 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_PSEU2 (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  247 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 729
            +   S IR + DFPKPG++F+DIT L    KA R  ID FV+RY D   S +  ++ARGF+ G  +A  +    V  RK  KLP +V+SE Y  EYG+  +E+H  ++  G+  ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G +RL +
Sbjct:    6 SNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGGSKRLND 166          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_LACS1 (Adenine phosphoribosyltransferase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 71/153 (46.41%), Postives = 103/153 (67.32%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I  I ++P+ GI+F+DI+ L+ D +A+R   D  V+  KDK + ++ G EARGFI G P+A  +G  F P RK  KLP E +  +YSLEYG   + MH  AV+ G++ L+ DDL+ATGGT+ A I L+E++G  VV CA +IEL +L GR+++
Sbjct:    9 IASIENYPEEGIVFRDISPLMADGEAYRQATDRIVQFAKDKGVEMIVGPEARGFIVGCPVAYELGVGFAPARKKGKLPRETVKADYSLEYGTASLYMHKDAVKPGQKVLVTDDLLATGGTIGATIDLVEQLGGVVVGCAFIIELEDLHGRDKI 161          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_LACH4 (Adenine phosphoribosyltransferase OS=Lactobacillus helveticus (strain DPC 4571) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 76/165 (46.06%), Postives = 103/165 (62.42%), Query Frame = 1
Query:  256 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            S  I  + DFP  GI+F+DIT +L D + +R       E  K +   V+ G EARGFI G P+A  +G  FVP RKP KLP EV    Y LEYG + +EMH  A++ G+R ++ DDL+AT GTL A+  L+E +G  +V  A  IELP+LKGRE+L +  ++ LV
Sbjct:    6 SKYIASVKDFPNKGIVFRDITPILQDGELYRIATHELAEYAKSRKADVIVGPEARGFIVGCPVATELGLGFVPARKPHKLPREVERASYDLEYGSNSLEMHKDAIKPGQRVVLCDDLMATAGTLRASKELIENLGGKLVGAAFYIELPDLKGREKLPDVDIYSLV 170          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_FRATT (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
The following BLAST results are available for this feature:
BLAST of CN184796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_XANOR2.171e-3446.71Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_XANOP2.171e-3446.71Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_XANOM2.171e-3446.71Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_STRTD2.171e-3448.37Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRT22.171e-3448.37Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRT12.171e-3448.37Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_PSEU22.171e-3444.72Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_LACS12.171e-3446.41Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_LACH42.171e-3446.06Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_FRATT2.171e-3448.43Adenine phosphoribosyltransferase OS=Francisella t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184796 ID=CN184796; Name=CN184796; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAGGCGTGATGCATGCTGCAGCTTCACTTCTTAACTCTTCAAACCT
CTCCCTTCGCTTTGCATCTCAAACGCAGACACGACTCTCTCCCTGGATCG
CCGCTCCCTCCTCTGTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGA
ATTGCACTCCCTCCTCTGCATTCCACCGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGG
AGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGAC
GATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGA
GCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAG
AGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTA
AGCTAAACTTGAC
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