CN184796

Overview
NameCN184796
Unique NameCN184796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_FRATN (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_FRATM (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_FRAT1 (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_BACTN (Adenine phosphoribosyltransferase OS=Bacteroides thetaiotaomicron GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 1
Query:  262 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 729
            +IR IPDFP PGI+F D+TTL  D    ++  ++  E YKDK I+ V GIE+RGFI GP +A  + A F+P+RKP KLP EVI E Y  EYG D +++H  A+   +  L+ DDL+ATGGT+ AA  L++++    V    +IEL +L G+   G+
Sbjct:   11 SIREIPDFPIPGILFYDVTTLFKDPWCLQELSNIMFEMYKDKGITKVVGIESRGFIMGPILATRLNAGFIPIRKPGKLPAEVIEESYDKEYGTDTVQIHKDALDENDVVLLHDDLLATGGTMKAACELVKKLKPKKVYVNFIIELKDLNGKSVFGD 166          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_ANATD (Adenine phosphoribosyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34
Identity = 74/157 (47.13%), Postives = 104/157 (66.24%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 723
            +    R + +FPK GI F DITT+L D  AF+  ID  V   KD +  ++ G E+RGFIFG P+A  +    V +RK  KLP + +S EY LEYGKDV+EMH+ A++ G++ +I+DDL+ATGGT  + I+L+E++G  VV  A ++EL  L GRE L
Sbjct:    3 LKEKFRHVLNFPKEGIDFIDITTVLQDKDAFKYAIDSLVNLVKDLDFELIVGPESRGFIFGAPVAYVLNKGLVLVRKKGKLPYKTVSVEYELEYGKDVLEMHIDAIKPGQKVVIIDDLLATGGTTLSNIKLVEKLGGEVVGIAYLVELTYLGGRENL 159          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_LACBA (Adenine phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=apt PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.835e-34
Identity = 73/162 (45.06%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  265 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            I  +PD+P+ GIMF+DI+ L+ D +AF    D  V   KDK++ +V G EARGFI G P+A  +G  F P RK  KLP E +   Y LEYG+  + +H  A++ G++ L+ DDL+ATGGT+ A I+L+E +G  VV  A +IEL +L GR++L    +F L+
Sbjct:    9 IASVPDYPEKGIMFRDISPLMADGQAFHAATDEIVAYAKDKDVEMVVGPEARGFIVGCPVAYEMGIGFAPARKEGKLPRETVKASYDLEYGQSALYLHKDAIKPGQKVLVTDDLLATGGTIGATIQLVEDLGGIVVGTAFLIELQDLHGRDKLKGYDIFSLM 170          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_BACV8 (Adenine phosphoribosyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=apt PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.835e-34
Identity = 72/159 (45.28%), Postives = 102/159 (64.15%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 729
            + + +R IPDFP PGI+F D+TTL  + +  ++ +D   E YKDK I+ V GIE+RGFI G  +A  +GA FV  RKP KLP EV+ E Y+ EYG D +++H  A+   +  L+ DDL+ATGGT++A  RL++R G   +    +IEL  L GR+   E
Sbjct:    6 LKANLREIPDFPIPGILFYDVTTLFKNPECLQEILDTLYEMYKDKGITKVVGIESRGFIMGGALAARLGAGFVMARKPGKLPAEVVEETYAKEYGTDTIQIHKDAIDENDVVLLHDDLLATGGTMAATHRLVQRCGAKKIFINFIIELGGLNGRKAFPE 164          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_TREPS (Adenine phosphoribosyltransferase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=apt PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34
Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 1
Query:  247 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            A +  AIR   DFPK GI++ DIT +L++   FR  +D  VE Y+D++++ VA IE+RGFIF  P A  +G   + +RK  KLPG+  S  YSLEYGK  +E+H   V AG R L+ DDL+ATGGTL+AA  +L   G  VV    V+ LP L+  E +G+ P+  L+
Sbjct:   15 AALDRAIRKRIDFPKKGILYYDITGVLMNAAVFRYCLDQMVEFYRDEHVTAVAAIESRGFIFAAPFADRMGIPLILVRKAGKLPGDTYSCSYSLEYGKATVEVHKSDVVAGARVLLTDDLIATGGTLNAARTMLRAGGAEVVGFFAVVGLPFLRYHELIGDLPVRTLI 182          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_TREPA (Adenine phosphoribosyltransferase OS=Treponema pallidum GN=apt PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34
Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 1
Query:  247 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 750
            A +  AIR   DFPK GI++ DIT +L++   FR  +D  VE Y+D++++ VA IE+RGFIF  P A  +G   + +RK  KLPG+  S  YSLEYGK  +E+H   V AG R L+ DDL+ATGGTL+AA  +L   G  VV    V+ LP L+  E +G+ P+  L+
Sbjct:   15 AALDRAIRKRIDFPKKGILYYDITGVLMNAAVFRYCLDQMVEFYRDEHVTAVAAIESRGFIFAAPFADRMGIPLILVRKAGKLPGDTYSCSYSLEYGKATVEVHKSDVVAGARVLLTDDLIATGGTLNAARTMLRAGGAEVVGFFAVVGLPFLRYHELIGDLPVRTLI 182          
BLAST of CN184796 vs. ExPASy Swiss-Prot
Match: APT_SPHAL (Adenine phosphoribosyltransferase OS=Sphingopyxis alaskensis GN=apt PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34
Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  253 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 726
            ++S +R IPDFP+PGI F+DITTL+ D   F +++             ++  +EARGF+FG  +A A+G   VP+RK  KLPG  I  +Y LEYG D +E+H GAV  G R ++VDDL+ATGGT+ A   L+  VG  V     VI+LP+L G  RLG
Sbjct:   12 LASLVRTIPDFPRPGIQFRDITTLIGDAVGFAESVRRLSACAAAYRPDLIVAVEARGFLFGAAMATAMGLGVVPVRKAGKLPGVTIGVDYELEYGTDRLELHEGAVLPGHRVVLVDDLLATGGTILATAALMRSVGAEVAAALFVIDLPDLGGSARLG 169          
The following BLAST results are available for this feature:
BLAST of CN184796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_FRATN2.171e-3448.43Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRATM2.171e-3448.43Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRAT12.171e-3448.43Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_BACTN2.171e-3446.15Adenine phosphoribosyltransferase OS=Bacteroides t... [more]
APT_ANATD2.171e-3447.13Adenine phosphoribosyltransferase OS=Anaerocellum ... [more]
APT_LACBA2.835e-3445.06Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_BACV82.835e-3445.28Adenine phosphoribosyltransferase OS=Bacteroides v... [more]
APT_TREPS3.703e-3445.83Adenine phosphoribosyltransferase OS=Treponema pal... [more]
APT_TREPA3.703e-3445.83Adenine phosphoribosyltransferase OS=Treponema pal... [more]
APT_SPHAL3.703e-3446.20Adenine phosphoribosyltransferase OS=Sphingopyxis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184796 ID=CN184796; Name=CN184796; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAGGCGTGATGCATGCTGCAGCTTCACTTCTTAACTCTTCAAACCT
CTCCCTTCGCTTTGCATCTCAAACGCAGACACGACTCTCTCCCTGGATCG
CCGCTCCCTCCTCTGTTCGCCTACCGTTGAACCGCTCGCAAAATTACAGA
ATTGCACTCCCTCCTCTGCATTCCACCGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGG
AGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGAC
GATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGA
GCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAG
AGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTA
AGCTAAACTTGAC
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